Louisiana State University Computational Systems Biology Group

09 May 2024

Computational Systems Biology aims to develop and apply efficient algorithms to address critical scientific questions through computer simulations and theoretical modeling. The system-wide modeling is particularly relevant in modern biological sciences, where the key...

LROSE

09 May 2024

LROSE is a National Science Foundation (NSF) supported project to develop common software for the Lidar, Radar, and Profiler community. LROSE is based on collaborative, open source development. The core package is jointly developed by Colorado State University (CSU)...

m+m: movement + meaning

09 May 2024

m+m: movement + meaning is developing a software framework that, broadly speaking, enables researchers to construct meaningful semantic models of movement data. The acquisition, processing, and rendering of movement data can be local or distributed, real-time or...

maizeGDB

09 May 2024

MaizeGDB (maize genetics and genomics database) is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays.

Manylabs

09 May 2024

Manylabs is a community hacker space or open science and Education. We hold public events and provide a residency program for people working on their own projects

MapStory

09 May 2024

MapStory is an online social cartographic platform that empowers a community of experts to crowd-source and peer review data within a geospatial and temporal framework. Mapstory uses GeoNode, a spatial data infrastructure solution that extends the OpenGeo...

Marine Metagenomics Portal (MMP)

09 May 2024

The mission of Marine Metagenomics Portal (MMP) is to provide the marine scientific community with high-quality curated and freely accessible microbial genomics and metagenomics resources.

Marine Virtual Laboratory (MARVL)

09 May 2024

MARVL enables researchers interested in marine modelling access to an online portal that simplifies the process of marine modelling. It allows researchers to obtain a pre-prepared package using simple workflow by combining geographic location, datasets, forcing data...

Materials Data Curation System

09 May 2024 | Science Gateways

The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

Materials Data Facility (MDF)

09 May 2024 | Science Gateways

The Materials Data Facility (MDF) is set of data services built specifically to support materials science researchers. MDF consists of two synergistic services, data publication and data discovery (in development). The production-ready data publication service offers...

MATIN - Materials Innovation Network

09 May 2024 | Science Gateways

MATerials Innovation Network (MATIN) is an advanced cloud-based platform developed with a mission to accelerate materials innovation. MATIN is the product of the initiative and related efforts by the Institute for Materials (IMat) at Georgia Institute of Technology...

MCRN

09 May 2024 | Science Gateways

This hub specializes in collection of data on the study of climate change and mathematics of climate.

MDAnalysis

09 May 2024 | Science Gateways

MDAnalysis is an object-oriented python toolkit to analyze molecular dynamics trajectories generated by CHARMM, Gromacs, NAMD, LAMMPS, Amber or DL_POLY; it also reads other formats (e.g. PDB files and XYZ format trajectories; see the supported coordinate formats for...

Medicago truncatula genome database

09 May 2024 | Science Gateways

Medicago truncatula, a close relative of alfalfa, is a preeminent model for the study of the processes of nitrogen fixation, symbiosis, and legume genomics. The sequencing project was initiated with a generous grant from Samuel Roberts Noble Foundation (link is...

MERLOT

09 May 2024 | Science Gateways

MERLOT (Multimedia Educational Resource for Learning and Online Teaching) is a curated collection of free and open online teaching, learning, and faculty development services contributed and used by an international education community.

MESA-Web

09 May 2024 | Science Gateways

Stellar evolution codes can be complicated to use, so we are offering MESA-Web, a web-based interface to the stellar evolution code, Modules for Experiments in Stellar Astrophysics (MESA, http://mesa.sourceforge.net/). MESA-Web can be used for education purposes to...

MetaboAnalyst

09 May 2024 | Science Gateways

MetaboAnalyst aims to offer a variety of commonly used procedures for metabolomic data processing, normalization, multivariate statistical analysis, as well as data annotation.

MetaboLights

09 May 2024 | Science Gateways

MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

Metadyn View

09 May 2024 | Science Gateways

MetadynView is a web tool for visualization and analysis of free energy surfaces calculated by metadynamics method, in particular by Plumed package.

MetalPDB

09 May 2024 | Science Gateways

MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

MetaNetX

09 May 2024 | Science Gateways

MetaNetX is a repository of genome-scale metabolic networks (GSMNs) and biochemical pathways from a number of major resources imported into a common namespace of chemical compounds, reactions, cellular compartments - namely MNXref - and proteins. The MetaNetX.org...

Metaproteomics Gateway

26 Jun 2024 | Science Gateways

Galaxy-P platform offers an open source, bioinformatics platform for disseminating metaproteomics software and workflows. This was a result of metaproteomics contribution-fest (z.umn.edu/mphack2016) which generated easily accessible and documented metaproteomic software tools and workflows. The...

metastudio

09 May 2024 | Science Gateways

A platform evolving as an online academy for collaborative learning with a focus on the culture of learning as against content for learning. This platform is being made and maintained by the gnowledge lab of Homi Bhabha Centre for Science Education, Tata Institute of...

MGnify

09 May 2024 | Science Gateways

MGnify offers an automated pipeline for the analysis and archiving of microbiome data to help determine the taxonomic diversity and functional & metabolic potential of environmental samples. Users can submit their own data for analysis or freely browse all of the...

Microbial Genomes Atlas

26 Jun 2024 | Science Gateways

The Microbial Genomes Atlas –MiGA– processes Prokaryotic genomes (draft or complete), applies different quality checks, and identifies the closest relatives in public databases using a combination of genome-wide identity metrics such as the average nucleotide identity (ANI) and the...