Skip to main content

Resources: All

Find a resource
  1. analysis x
  2. database x
  3. genomics x
  4. software x
  1. ArrayExpress

    09 May 2024

    ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.

  2. Benchmark Energy & Geometry Database (BEGDB)

    09 May 2024

    The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

  3. BIGNASim

    09 May 2024

    BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

  4. BioFragment Database (BFDb)

    09 May 2024

    The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

  5. BRENDA

    09 May 2024

    BRENDA is the main collection of enzyme functional data available to the scientific community.

  6. CANARIE's Research Platforms

    09 May 2024

    The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.

  7. CAZY

    09 May 2024

    The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

  8. cdmHUB

    09 May 2024

    cdmHUB is the premier online portal for composites resources, information, and networking. We host a rapidly growing collection of composites apps and commercial tools that run in the cloud and are accessible through a web browser. cdmHUB also provides...

  9. ChEMBL

    09 May 2024

    ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and abstracted bioactivities (e.g. binding constants, pharmacology and ADMET data). The data is...

  10. Chemical Entities of Biological Interest (ChEBI)

    09 May 2024

    Chemical Entities of Biological Interest (ChEBI) is a freely available dictionary of molecular entities focused on ‘small’ chemical compounds. The term ‘molecular entity’ refers to any constitutionally or isotopically distinct atom, molecule, ion, ion pair, radical,...

  11. Citizen Science Alliance

    09 May 2024

    The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

  12. Citizen Science Alliance

    09 May 2024

    The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

  13. CoGe(Comparative Genomics)

    09 May 2024

    CoGe is a platform for performing Comparative Genomics research. It provides an open-ended network of interconnected tools to manage, analyze, and visualize next-gen data.

  14. Coherent X-ray Imaging Data Bank (CXIDB)

    09 May 2024

    Nowadays there are several groups around the world doing excellent work using different kinds of techniques all based on the physics of coherent X-ray imaging (CXI). Due to several reasons, including lack of a standard file format, there has been limited sharing of...

  15. Compute Canada

    09 May 2024

    Compute Canada enables Canadian researchers to perform world-class research using Advanced Research Computing (ARC) strategies. The organization helps researchers who need ARC in all disciplines and at all scales; from individual researchers to some of the largest...

  16. COSMIC2 Science Gateway

    09 May 2024 | Science Gateways

    Structural biology is in the midst of a revolution. Instrumentation and software improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as a tool capable of determining atomic structures of protein and macromolecular samples. These...

  17. CTD² Data Portal

    09 May 2024 | Science Gateways

    CTD2 bridges the gap between the enormous volumes of data generated by genomic characterization studies and the ability to use these data for the development of human cancer therapeutics. It specializes in computational and functional genomics approaches critical for...

  18. CyVerse

    09 May 2024 | Science Gateways

    CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...

  19. Diagrid

    09 May 2024 | Science Gateways

    Allows science software to be run through a web browser

  20. DipCheck

    09 May 2024 | Science Gateways

    DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

  21. DSpace - open digital repository

    09 May 2024 | Science Gateways

    DSpace is the software of choice for academic, non-profit, and commercial organizations building open digital repositories. It preserves and enables easy and open access to all types of digital content including text, images, moving images, mpegs and data sets. ...

  22. Earth Life Consortium (ELC)

    09 May 2024 | Science Gateways

    The Earth-Life Consortium (ELC) seeks to make all paleobiological data easily discoverable, accessible, and analyzable, with the larger goal of understanding the interactions between the Earth's biological and geophysical systems across all timescales of the Earth's...

  23. European Variation Archive (EVA)

    09 May 2024 | Science Gateways

    The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

  24. GenomeSpace

    09 May 2024 | Science Gateways

    GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to...

  25. GeoMapApp

    09 May 2024 | Science Gateways

    GeoMapApp is an earth science exploration and visualization application that is continually being expanded as part of the Marine Geoscience Data System (MGDS) at the Lamont-Doherty Earth Observatory of Columbia University. The application provides direct access to...