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  1. ATLAS@Home

    09 May 2024

    ATLAS@Home is a research project that uses volunteer computing to run simulations of the ATLAS experiment at CERN. You can participate by downloading and running a free program on your computer.

  2. Benchmark Energy & Geometry Database (BEGDB)

    09 May 2024

    The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

  3. BIGNASim

    09 May 2024

    BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

  4. BioFragment Database (BFDb)

    09 May 2024

    The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

  5. BRENDA

    09 May 2024

    BRENDA is the main collection of enzyme functional data available to the scientific community.

  6. CAZY

    09 May 2024

    The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

  7. CyVerse

    09 May 2024

    CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...

  8. DipCheck

    09 May 2024

    DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

  9. e-Biogenouest

    09 May 2024

    e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

  10. Earth Science Information Partners (ESIP)

    09 May 2024

    The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

  11. European Variation Archive (EVA)

    09 May 2024

    The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

  12. IntAct Molecular Interaction Database

    09 May 2024

    IntAct provides a freely available, open source database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.

  13. IntEnz

    09 May 2024

    IntEnz (Integrated relational Enzyme database) is a freely available resource focused on enzyme nomenclature. IntEnz is created in collaboration with the Swiss Institute of Bioinformatics (SIB). This collaboration is responsible for the production of the ENZYME...

  14. InterRidge Vents Database

    09 May 2024

    InterRidge Vents Database is to provide a comprehensive list of active submarine hydrothermal vent fields for use in academic research and education.

  15. maizeGDB

    09 May 2024

    MaizeGDB (maize genetics and genomics database) is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays.

  16. MetaboLights

    09 May 2024

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  17. MetalPDB

    09 May 2024

    MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

  18. MicroScope

    09 May 2024 | Science Gateways

    MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

  19. Molecular Space

    09 May 2024 | Science Gateways

    The Clean Energy Project (CEP) is a virtual high-throughput discovery and design effort for the next generation of plastic solar cell materials. We study millions of candidate structures to identify suitable compounds for the harvesting of renewable energy from the...

  20. Neotoma Paleoecology Database

    09 May 2024 | Science Gateways

    Neotoma Paleoecology Database and Community is an online hub for data, research, education, and discussion about paleoenvironments. Anyone with an Internet connection can access Neotoma.

  21. ODM2(Observations Data Model 2)

    09 May 2024 | Science Gateways

    ODM2 is an information model and supporting software ecosystem for feature-based earth observations, designed to facilitate interoperability across scientific disciplines and domain cyberinfrastructures. For example, a single ODM2 database can readily integrate...

  22. OMA

    09 May 2024 | Science Gateways

    The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes.

  23. Paleobiology Database (PBDB)

    09 May 2024 | Science Gateways

    The Paleobiology Database is a public database of paleontological data that anyone can use, maintained by an international non-governmental group of paleontologists. You can explore the data online in the Navigator, which lets you filter fossil occurrences by time,...

  24. PHARMACOLOGY

    09 May 2024 | Science Gateways

    One of the main aims is to provide a searchable database with quantitative information on drug targets and the prescription medicines and experimental drugs that act on them. The information in the database is presented at two levels: the initial view or landing...

  25. Phylogeny.fr

    09 May 2024 | Science Gateways

    Phylogeny.fr has been designed to provide a high performance platform that transparently chains programs relevant to phylogenetic analysis in a comprehensive, and flexible pipeline. Although phylogenetic aficionados will be able to find most of their favorite tools...