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  1. Crops in silico

    09 May 2024

    Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

  2. MetalPDB

    09 May 2024

    MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

  3. SwissRegulon Portal

    09 May 2024

    A repository of computational biology tools and databases developed by the van Nimwegen lab

  4. SwissRegulon Portal

    09 May 2024

    A repository of computational biology tools and databases developed by the van Nimwegen lab

  5. PeanutBase

    09 May 2024

    This web portal is designed to provide convenient access to peanut genetic and genomic data deriving from U.S. and international research, and particularly from the Peanut Genomics Initiative: The U.S. industry has embarked on an ambitious plan to map the peanut...

  6. NCI Community Hub

    09 May 2024

    The NCI Community Hub is a site for community research and collaboration in cancer research and informatics. Users can share resources, host online communities, and use collaboration tools . These resources are available to visitors ...

  7. BIGNASim

    09 May 2024

    BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

  8. VIDIA

    09 May 2024

    Virtual Infrastructure for Data Intensive Analysis (VIDIA) unites SUNY Oneonta and University at Buffalo's Center for Computational Research to support the analysis of large datasets by social science students at Primarily Undergraduate Institutions (PUIs). VIDIA is...

  9. Wheat Tilling

    09 May 2024

    Wheat Target Induced Local Lesions In Genome (TILLING) project based on the tetraploid wheat line Triticum turgidum cv. Kronos. This project entails targeted re-sequencing of the protein coding regions of over 1500 EMS mutagenized individuals from the Kronos...

  10. TreeGenes

    09 May 2024

    TreeGenes is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest...

  11. GenSAS

    09 May 2024

    The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and...

  12. BamBam

    09 May 2024 | Tools

    BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...

  13. maizeGDB

    09 May 2024 | Science Gateways

    MaizeGDB (maize genetics and genomics database) is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays.

  14. Genomicus

    09 May 2024 | Science Gateways

    Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in...

  15. Genomics Virtual Laboratory (GVL)

    09 May 2024 | Science Gateways

    The Genomics Virtual Laboratory (GVL) provides a cloud-based suite of genomics analysis tools for research and training.

  16. MetaboAnalyst

    09 May 2024 | Science Gateways

    MetaboAnalyst aims to offer a variety of commonly used procedures for metabolomic data processing, normalization, multivariate statistical analysis, as well as data annotation.

  17. Biodiversity and Climate Change Virtual Laboratory

    09 May 2024 | Science Gateways

    The Biodiversity and Climate Change Virtual Laboratory (BCCVL) is a “one stop modelling shop” that simplifies the process of biodiversity-climate change modelling.

  18. PLEXdb

    09 May 2024 | Science Gateways

    PLEXdb (Plant Expression Database) is a unified gene expression resource for plants and plant pathogens. PLEXdb is a genotype to phenotype, hypothesis building information warehouse, leveraging highly parallel expression data with seamless portals to related genetic,...

  19. Genome Database for Rosaceae (GDR)

    09 May 2024 | Science Gateways

    The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...

  20. CLIPC: Constructing Europe's Climate Information Portal

    09 May 2024 | Science Gateways

    CLIPC provides access to climate information of direct relevance to a wide variety of users, catering for consultant advisers, policy makers, private sector decision makers and scientists, but also interested members of the general public. This one-stop-shop platform...