SUPER Project

09 May 2024

The Institute for Sustained Performance, Energy, and Resilience (SUPER) project is a broadly-based SciDAC institute with expertise in compilers and other system tools, performance engineering, energy management, and resilience. The goal of the project is to ensure...

MetalPDB

09 May 2024

MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

iRODS

09 May 2024

The Integrated Rule Oriented Data System, iRODS, is open source data management software designed to manage data sets that are big, important, and complex. Hundreds of organizations worldwide use iRODS to control their records and research data. ...

CoGe(Comparative Genomics)

09 May 2024

CoGe is a platform for performing Comparative Genomics research. It provides an open-ended network of interconnected tools to manage, analyze, and visualize next-gen data.

Earth Life Consortium (ELC)

09 May 2024

The Earth-Life Consortium (ELC) seeks to make all paleobiological data easily discoverable, accessible, and analyzable, with the larger goal of understanding the interactions between the Earth's biological and geophysical systems across all timescales of the Earth's...

COSMIC2 Science Gateway

09 May 2024 | Science Gateways

Structural biology is in the midst of a revolution. Instrumentation and software improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as a tool capable of determining atomic structures of protein and macromolecular samples. These...

Keycloak - Open Source Identity and Access Management

09 May 2024 | Science Gateways

Keycloak is an open source Identity and Access Management solution aimed at modern applications and services. It makes it easy to secure applications and services with little to no code.

ROBETTA - Full-chain Protein Structure Prediction Server

09 May 2024 | Science Gateways

Robetta provides both ab initio and comparative models of protein domains. Domains without a detectable PDB homolog are modeled with the Rosetta de novo protocol (Simons et al. (1997) J Mol Biol. 268:209-225, Bradley et al. (2005) Science 309 (5742), 1868-71)....

OpenTopography

09 May 2024 | Science Gateways

OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources. OpenTopography is supported by the National Science Foundation under Award Numbers 1948997, 1948994 & 1948857.

TAPIS

09 May 2024 | Science Gateways

The Tapis Framework provides a hosted, unified web-based API for securely managing computational workloads across institutions so that experts can focus on their research instead of the technology needed to accomplish it. The advanced computing infrastructure landscape has evolved tremendously...

NCI Community Hub

09 May 2024 | Science Gateways

The NCI Community Hub is a site for community research and collaboration in cancer research and informatics. Users can share resources, host online communities, and use collaboration tools . These resources are available to visitors ...

Whole Tale

09 May 2024 | Science Gateways

Merging Science and Cyberinfrastructure PathwayWhole Tale is an NSF-funded Data Infrastructure Building Block (DIBBS) initiative to build a scalable, open source, web-based, multi-user platform for reproducible research enabling the creation,...

GeoMapApp

09 May 2024 | Science Gateways

GeoMapApp is an earth science exploration and visualization application that is continually being expanded as part of the Marine Geoscience Data System (MGDS) at the Lamont-Doherty Earth Observatory of Columbia University. The application provides direct access to...

GeoMapApp

09 May 2024 | Science Gateways

GeoMapApp is an earth science exploration and visualization application that is continually being expanded as part of the Marine Geoscience Data System (MGDS) at the Lamont-Doherty Earth Observatory of Columbia University. The application provides direct access to...

Plant Genomics

09 May 2024 | Science Gateways

Plant genomics is a simple expansion of the scope of genomics at the National Center for Biotechnology Information (NCBI). NCBI provides the tools for storage of and analysis of nucleotide sequence such as, respectively, GenBank and BLAST and the capability to...

VIDIA

09 May 2024 | Science Gateways

Virtual Infrastructure for Data Intensive Analysis (VIDIA) unites SUNY Oneonta and University at Buffalo's Center for Computational Research to support the analysis of large datasets by social science students at Primarily Undergraduate Institutions (PUIs). VIDIA is...

CANARIE's Research Platforms

09 May 2024 | Science Gateways

The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.

Multiscale Complex Genomics (MuG) Virtual Research Environment

09 May 2024 | Science Gateways

The MuG Virtual Research Environment supports the expanding 3D/4D genomics community by developing tools to integrate the navigation in genomics data from sequence to 3D/4D chromatin dynamics data.

maizeGDB

09 May 2024 | Science Gateways

MaizeGDB (maize genetics and genomics database) is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays.

NGSEP (Next Generation Sequencing Eclipse Plugin)

09 May 2024 | Science Gateways

NGSEP (Next Generation Sequencing Eclipse Plugin), an integrated framework for analysis of high throughput sequencing reads. The main functionality of NGSEP is the variants detector, which allows to make simultaneous discovery of SNVs, indels, and CNVs. NGSEP also...

MetaboAnalyst

09 May 2024 | Science Gateways

MetaboAnalyst aims to offer a variety of commonly used procedures for metabolomic data processing, normalization, multivariate statistical analysis, as well as data annotation.

Carbon Mapper

09 May 2024 | Science Gateways

Carbon Mapper’s goal is to help stakeholders visualize and understand the earth’s carbon cycle and related human activity and to seek feedback on how to improve data from monitoring systems.

Biodiversity and Climate Change Virtual Laboratory

09 May 2024 | Science Gateways

The Biodiversity and Climate Change Virtual Laboratory (BCCVL) is a “one stop modelling shop” that simplifies the process of biodiversity-climate change modelling.

GenomeSpace

09 May 2024 | Science Gateways

GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to...

The Earth Observing System Data and Information System (EOSDIS)

09 May 2024 | Science Gateways

The Earth Observing System Data and Information System (EOSDIS) is a key core capability in NASA’s Earth Science Data Systems (ESDS) Program. It provides end-to-end capabilities for managing NASA’s Earth science data from various sources – satellites, aircraft, field...