PlantingScience

09 May 2024

PlantingScience is a free online resource to teachers and schools. The program provides volunteer scientists, resources, and activities to support innovation in teaching, learning, and mentoring. Open education resources are shared for student-centered plant...

HRGRN

09 May 2024

We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

e-Biogenouest

09 May 2024

e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

Diagrid

09 May 2024

Allows science software to be run through a web browser

The Triticeae Toolbox (T3)

09 May 2024

T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

VEP

09 May 2024

VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

Vega

09 May 2024

Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

Coherent X-ray Imaging Data Bank (CXIDB)

09 May 2024

Nowadays there are several groups around the world doing excellent work using different kinds of techniques all based on the physics of coherent X-ray imaging (CXI). Due to several reasons, including lack of a standard file format, there has been limited sharing of...

GlobalHUB

09 May 2024 | Science Gateways

GlobalHUB is a virtual global community of students, faculty, and practitioners, interested in global engineering and global citizenship. The specific mission of GlobalHUB is to create an online community of scholars, practitioners, and students to advance global...

nectar

09 May 2024 | Science Gateways

The National eResearch Collaboration Tools and Resources project (Nectar) provides an online infrastructure that supports researchers to connect with colleagues in Australia and around the world, allowing them to collaborate and share ideas and research outcomes,...

NCBI Genome Workbench

09 May 2024 | Science Gateways

Genome Workbench offers researchers a rich set of integrated tools for studying and analyzing genetic data. Users can explore and compare data from multiple sources including the NCBI databases or the user’s own private data. Data analysis in Genome Workbench is...

SERC

09 May 2024 | Science Gateways

The Science Education Resource Center (SERC) is a grant-funded office at Carleton College, founded to improve education in the Earth sciences and beyond.

CottonGen

09 May 2024 | Science Gateways

CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

PHARMACOLOGY

09 May 2024 | Science Gateways

One of the main aims is to provide a searchable database with quantitative information on drug targets and the prescription medicines and experimental drugs that act on them. The information in the database is presented at two levels: the initial view or landing...

ORCA (Open Resource Control Architecture)

09 May 2024 | Science Gateways

ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

ChEMBL

09 May 2024 | Science Gateways

ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and abstracted bioactivities (e.g. binding constants, pharmacology and ADMET data). The data is...

Tripal

09 May 2024 | Science Gateways

Tripal is a toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and is a member of the GMOD family of tools. Tripal provides by default integration with the GMOD Chado database schema and Drupal, a popular Content...

Crops in silico

09 May 2024 | Science Gateways

Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

SUPER Project

09 May 2024 | Science Gateways

The Institute for Sustained Performance, Energy, and Resilience (SUPER) project is a broadly-based SciDAC institute with expertise in compilers and other system tools, performance engineering, energy management, and resilience. The goal of the project is to ensure...

MetalPDB

09 May 2024 | Science Gateways

MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

iRODS

09 May 2024 | Science Gateways

The Integrated Rule Oriented Data System, iRODS, is open source data management software designed to manage data sets that are big, important, and complex. Hundreds of organizations worldwide use iRODS to control their records and research data. ...

QUBEShub

09 May 2024 | Science Gateways

To improve learning opportunities for all students enrolled in undergraduate biology courses by reflecting the centrality of quantitative approaches in modern biology.

SwissRegulon Portal

09 May 2024 | Science Gateways

A repository of computational biology tools and databases developed by the van Nimwegen lab

Earth Life Consortium (ELC)

09 May 2024 | Science Gateways

The Earth-Life Consortium (ELC) seeks to make all paleobiological data easily discoverable, accessible, and analyzable, with the larger goal of understanding the interactions between the Earth's biological and geophysical systems across all timescales of the Earth's...

COSMIC2 Science Gateway

09 May 2024 | Science Gateways

Structural biology is in the midst of a revolution. Instrumentation and software improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as a tool capable of determining atomic structures of protein and macromolecular samples. These...