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  1. vHUB

    09 May 2024

    VHub is an online resource for collaboration in volcanology research and risk mitigation. VHub provides easy mechanisms for sharing tools to model volcanic processes and analyze volcano data, to share resources such as teaching materials and workshops, and to...

  2. HRGRN

    09 May 2024

    We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

  3. e-Biogenouest

    09 May 2024

    e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

  4. e-Biogenouest

    09 May 2024

    e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

  5. Diagrid

    09 May 2024

    Allows science software to be run through a web browser

  6. DataCenterHub

    09 May 2024

    This hub allows for the organization, preservation, and sharing of scientific and engineering data.

  7. The Triticeae Toolbox (T3)

    09 May 2024

    T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

  8. VEP

    09 May 2024

    VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

  9. Vega

    09 May 2024

    Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

  10. SmarterAgriculture

    09 May 2024

    This Smarter Agriculture™ platform will provide plant science researchers with a data management infrastructure that will organize data from many disparate streams in a cohesive way.

  11. Coherent X-ray Imaging Data Bank (CXIDB)

    09 May 2024

    Nowadays there are several groups around the world doing excellent work using different kinds of techniques all based on the physics of coherent X-ray imaging (CXI). Due to several reasons, including lack of a standard file format, there has been limited sharing of...

  12. NCBI Genome Workbench

    09 May 2024

    Genome Workbench offers researchers a rich set of integrated tools for studying and analyzing genetic data. Users can explore and compare data from multiple sources including the NCBI databases or the user’s own private data. Data analysis in Genome Workbench is...

  13. CottonGen

    09 May 2024

    CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

  14. PHARMACOLOGY

    09 May 2024

    One of the main aims is to provide a searchable database with quantitative information on drug targets and the prescription medicines and experimental drugs that act on them. The information in the database is presented at two levels: the initial view or landing...

  15. ORCA (Open Resource Control Architecture)

    09 May 2024

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  16. ChEMBL

    09 May 2024

    ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and abstracted bioactivities (e.g. binding constants, pharmacology and ADMET data). The data is...

  17. Tripal

    09 May 2024

    Tripal is a toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and is a member of the GMOD family of tools. Tripal provides by default integration with the GMOD Chado database schema and Drupal, a popular Content...

  18. Crops in silico

    09 May 2024

    Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

  19. SUPER Project

    09 May 2024

    The Institute for Sustained Performance, Energy, and Resilience (SUPER) project is a broadly-based SciDAC institute with expertise in compilers and other system tools, performance engineering, energy management, and resilience. The goal of the project is to ensure...

  20. MetalPDB

    09 May 2024

    MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

  21. iRODS

    09 May 2024

    The Integrated Rule Oriented Data System, iRODS, is open source data management software designed to manage data sets that are big, important, and complex. Hundreds of organizations worldwide use iRODS to control their records and research data. ...

  22. SwissRegulon Portal

    09 May 2024

    A repository of computational biology tools and databases developed by the van Nimwegen lab

  23. Earth Life Consortium (ELC)

    09 May 2024

    The Earth-Life Consortium (ELC) seeks to make all paleobiological data easily discoverable, accessible, and analyzable, with the larger goal of understanding the interactions between the Earth's biological and geophysical systems across all timescales of the Earth's...

  24. COSMIC2 Science Gateway

    09 May 2024 | Science Gateways

    Structural biology is in the midst of a revolution. Instrumentation and software improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as a tool capable of determining atomic structures of protein and macromolecular samples. These...

  25. Keycloak - Open Source Identity and Access Management

    09 May 2024 | Science Gateways

    Keycloak is an open source Identity and Access Management solution aimed at modern applications and services. It makes it easy to secure applications and services with little to no code.