MultiPLX

09 May 2024

About the program: MultiPLX 2.1 is a tool for analyzing PCR primer compatibility and automatically finding optimal multiplexing (grouping) solution. It uses state-of-the-art nearest neighbour DNA binding thermodynamics to estimate possible unwanted...

DoD HPC portal

09 May 2024

US Department of Defense (DoD) High Performance Computing Modernization Program (HPCMP) provides a Web-based software-as-a-service (SaaS) access approach known as the HPC (High Performance Computing) Portal. The Portal supports the life cycle of design and...

Enzyme Portal

09 May 2024

The Enzyme Portal is for those interested in the biology of enzymes and proteins with enzymatic activity. It integrates publicly available information about enzymes, such as small-molecule chemistry, biochemical pathways and drug compounds.

Worldwide PDB (wwPDB)

09 May 2024

Since 1971, the Protein Data Bank archive (PDB) has served as the single repository of information about the 3D structures of proteins, nucleic acids, and complex assemblies. The Worldwide PDB (wwPDB) organization manages the PDB archive and ensures that the PDB is...

MapStory

09 May 2024

MapStory is an online social cartographic platform that empowers a community of experts to crowd-source and peer review data within a geospatial and temporal framework. Mapstory uses GeoNode, a spatial data infrastructure solution that extends the OpenGeo...

HOGENOM : Database of Complete Genome Homologous Genes Families

09 May 2024

HOGENOM is a database of homologous genes clusters in complete genome (bacteria, archeaea and eukarya). It allows to select sets of homologous genes among species, and to visualize multiple alignments and phylogenetic trees.

NOMAD Repository

09 May 2024

The Repository developed and maintained by NOMAD is now the largest repository for computational materials science worldwide, containing the input and output files from several million high-quality calculations. The volume of files made available through the NOMAD...

INCA: Monitoring Tool

09 May 2024

Determining whether a Grid is up in the face of complex Grid software deployments can be difficult and depends on the types of applications and users that utilize it. By detailing a set of software, services, and features that should be available on a Grid in a...

REDCap (Research Electronic Data Capture)

09 May 2024

REDCap (Research Electronic Data Capture) is a secure web application for building and managing online surveys and databases. While REDCap can be used to collect virtually any type of data (including 21 CFR Part 11, FISMA, and HIPAA-compliant environments), it is...

European Variation Archive

09 May 2024

The European Variation Archive is an open-access database of all types of genetic variation data from all species.

iMarine

09 May 2024

This gateway is an access point to a number of Virtual Research Environments deployed and operated in the context of the past iMarine EU FP7 project to support the Ecosystem Approach to fisheries management and conservation of marine living resources. It empowers...

Pegasus

09 May 2024

The Pegasus project encompasses a set of technologies that help workflow-based applications execute in a number of different environments including desktops, campus clusters, grids, and clouds. Pegasus bridges the scientific domain and the execution environment by...

HAMAP

09 May 2024

HAMAP is a system for the classification and functional annotation of protein sequences. It consists of a collection of expert curated family profiles for protein classification and associated rules for protein annotation.

NIST Materials Resource Registry (NMRR)

09 May 2024

This system allows for the registration of materials resources, bridging the gap between existing resources and the end users. The Materials Resource Registry functions as a centrally located service, making the registered information available for research to the...

Orphanet

09 May 2024

Orphanet is a unique resource, gathering and improving knowledge on rare diseases so as to improve the diagnosis, care and treatment of patients with rare diseases. Orphanet aims to provide high-quality information on rare diseases, and ensure equal access to...

EGI Applications Database(AppDB)

09 May 2024

The EGI Applications Database (AppDB) is a central service that stores and provides to the public information about: 1) software solutions in the form of native software products, virtual appliances and/or software appliances, 2) the programmers and the scientists...

GeoNode

09 May 2024

GeoNode is a web-based application and platform for developing geospatial information systems (GIS) and for deploying spatial data infrastructures (SDI).

Neotoma Paleoecology Database

09 May 2024

Neotoma Paleoecology Database and Community is an online hub for data, research, education, and discussion about paleoenvironments. Anyone with an Internet connection can access Neotoma.

CAMEO (Continuous Automated Model EvaluatiOn)

09 May 2024

CAMEO continuously applies quality assessment criteria established by the protein structure prediction community. Since the accuracy requirements for different scientific applications vary, there is no "one fits all" score. CAMEO therefore offers a variety of scores...

PROSITE

09 May 2024

PROSITE consists of entries describing protein domains, families and functional sites as well as associated patterns and profiles to identify them. PROSITE is a key element of the UniProt annotation pipeline “UniRule”.

IMMUNOPHARMACOLOGY

09 May 2024

The Guide to IMMUNOPHARMACOLOGY (GtoImmuPdb) is a Wellcome Trust-funded extension to the existing Guide to PHARMACOLOGY (GtoPdb). The development of GtoImmuPdb aims to provide improved data exchange between immunology and pharmacology expert communities, so to better...

Paleobiology Database (PBDB)

09 May 2024

The Paleobiology Database is a public database of paleontological data that anyone can use, maintained by an international non-governmental group of paleontologists. You can explore the data online in the Navigator, which lets you filter fossil occurrences by time,...

WebPlotViz: Browser based Visualization tool

09 May 2024

WebPlotViz is a 3D data point browser that visualizes large volume of 3-dimensional data as points in a virtual space on web browser and enable users to explore the virtual space interactively. Used together with dimension reduction algorithms such as MDS, WebPlotViz...

SoyBase

09 May 2024

SoyBase database was established in the 1990s as the USDA Soybean Genetics Database. Originally, it contained only genetic information about soybeans such as genetic maps and information about the Mendelian genetics of soybean. In time SoyBase was expanded to include...

HADDOCK (High Ambiguity Driven protein-protein DOCKing)

09 May 2024

HADDOCK (High Ambiguity Driven protein-protein DOCKing) is an information-driven flexible docking approach for the modeling of biomolecular complexes. HADDOCK distinguishes itself from ab-initio docking methods in the fact that it encodes information from identified...