SoyBase

09 May 2024

SoyBase database was established in the 1990s as the USDA Soybean Genetics Database. Originally, it contained only genetic information about soybeans such as genetic maps and information about the Mendelian genetics of soybean. In time SoyBase was expanded to include...

IPUMS TERRA

09 May 2024

Our understanding of interactions between population and environment has been hampered by differences in the data structures and analysis methods and tools used within different disciplines, as well as a dearth of internationally comparable data. Closely integrating...

Medicago truncatula genome database

09 May 2024

Medicago truncatula, a close relative of alfalfa, is a preeminent model for the study of the processes of nitrogen fixation, symbiosis, and legume genomics. The sequencing project was initiated with a generous grant from Samuel Roberts Noble Foundation (link is...

Citizen Science Alliance

09 May 2024

The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

MicroScope

09 May 2024 | Science Gateways

MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

Reactome

09 May 2024 | Science Gateways

REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome...

OMA

09 May 2024 | Science Gateways

The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes.

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

SciStarter

09 May 2024 | Science Gateways

Science we can do together

Citizen Science Alliance

09 May 2024 | Science Gateways

The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

Understanding Sea Level

09 May 2024 | Science Gateways

Learn more about the different causes of sea level change and the scientific background of observations and projecting sea level. Find out about the history of measuring sea level and how state-of-the-art physical climate models predict sea level change into the...

MCRN

09 May 2024 | Science Gateways

This hub specializes in collection of data on the study of climate change and mathematics of climate.

HRGRN

09 May 2024 | Science Gateways

We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

The Earth System Grid (ESG)

09 May 2024 | Science Gateways

The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the global climate change research community. The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the...

GLOBE

09 May 2024 | Science Gateways

GLOBE (Global Collaboration Engine) is an online collaborative environment that enables land change researchers to share, compare and integrate local and regional studies with global data to assess the global relevance of their work.

The Triticeae Toolbox (T3)

09 May 2024 | Science Gateways

T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

VEP

09 May 2024 | Science Gateways

VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

Vega

09 May 2024 | Science Gateways

Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

NCBI Genome Workbench

09 May 2024 | Science Gateways

Genome Workbench offers researchers a rich set of integrated tools for studying and analyzing genetic data. Users can explore and compare data from multiple sources including the NCBI databases or the user’s own private data. Data analysis in Genome Workbench is...

Spatial Portal for Analysis of Climatic Effects on Species (SPACES)

09 May 2024 | Science Gateways

The Spatial Portal for Analysis of Climatic Effects on Species (SPACES) allows anyone to design and run niche modeling experiments on any species with occurrence data in the well-known GBIF database. You select the species, climate layers and algorithms to run and we...

Physical Oceanography Distributed Active Archive Center (PO.DAAC)

09 May 2024 | Science Gateways

The mission of the PO.DAAC is to preserve NASA’s ocean and climate data and make these universally accessible and meaningful.

CottonGen

09 May 2024 | Science Gateways

CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

Crops in silico

09 May 2024 | Science Gateways

Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

SwissRegulon Portal

09 May 2024 | Science Gateways

A repository of computational biology tools and databases developed by the van Nimwegen lab

PeanutBase

09 May 2024 | Science Gateways

This web portal is designed to provide convenient access to peanut genetic and genomic data deriving from U.S. and international research, and particularly from the Peanut Genomics Initiative: The U.S. industry has embarked on an ambitious plan to map the peanut...