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BamBam

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Abstract

BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that can be readily understood, so a researcher can choose appropriate values without needing extensive knowledge of the individual tools and their underlying algorithms. BamBam provides a powerful and convenient framework to analyze genome sequence data contained in BAM files.

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Researchers should cite this work as follows:

  • (2019), "BamBam," https://sciencegateways.org/resources/bambam.

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