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  1. Zenodo

    09 May 2024

    As CERN service, it is supported by European Commission, and powered by Invenio, digital repositories. It is a free and open-source software for the long-tail of science, enabling researchers to share and preserve any research outputs in any size, any format and from...

  2. WINGS

    09 May 2024

    WINGS is a semantic workflow system that assists scientists with the design of computational experiments. A computational experiment specifies how selected datasets are to be processed by a series of software components in a particular configuration. Earth scientists...

  3. ARP/wARP 8.0

    09 May 2024

    ARP/wARP is a software project for automated protein model building and refinement. ARP/wARP combines pattern recognition-based interpretation of an electron density, its modelling as a hybrid model and a maximum likelihood parameter refinement with REFMAC.

  4. SLATE and the Mobility of Capability

    09 May 2024

    SLATE (Services Layer at the Edge) is a new project that, when complete, will implement “cyberinfrastructure as code” by augmenting the canonical Science DMZ pattern with a generic, programmable, secure and trusted underlayment platform.

  5. Open OnDemand

    09 May 2024

    Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

  6. Materials Data Curation System

    09 May 2024 | Science Gateways

    The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

  7. MetaboLights

    09 May 2024 | Science Gateways

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  8. BUSCO

    09 May 2024 | Science Gateways

    BUSCO v3 provides quantitative measures for the assessment of genome assembly, gene set, and transcriptome completeness, based on evolutionarily-informed expectations of gene content from near-universal single-copy orthologs selected from OrthoDB v9.

  9. PHYLOViZ

    09 May 2024 | Science Gateways

    PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

  10. Galaxy Software Framework

    09 May 2024 | Science Gateways

    Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

  11. Earth Science Information Partners (ESIP)

    09 May 2024 | Science Gateways

    The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

  12. EarthCube

    09 May 2024 | Science Gateways

    EarthCube was initiated by the National Science Foundation (NSF) in 2011 to transform geoscience research by developing cyberinfrastructure to improve access, sharing, visualization, and analysis of all forms of geosciences data and related resources. As a...

  13. DataOne

    09 May 2024 | Science Gateways

    DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

  14. The Earth System Grid (ESG)

    09 May 2024 | Science Gateways

    The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the global climate change research community. The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the...

  15. NEWT(NERSC Web Toolkit)

    09 May 2024 | Science Gateways

    NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

  16. earthscope

    09 May 2024 | Science Gateways

    EarthScope is a program of the National Science Foundation (NSF) that has deployed thousands of seismic, GPS, and other geophysical instruments to study the structure and evolution of the North American continent and the processes that cause earthquakes and volcanic...

  17. SERC

    09 May 2024 | Science Gateways

    The Science Education Resource Center (SERC) is a grant-funded office at Carleton College, founded to improve education in the Earth sciences and beyond.

  18. ORCA (Open Resource Control Architecture)

    09 May 2024 | Science Gateways

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  19. OSiRIS - Open Storage Research Infrastructure

    09 May 2024 | Science Gateways

    OSiRIS has storage resources at Wayne State University, Michigan State University, and University of Michigan. We can store data spread across all three sites or target storage resources at a subset of the sites. The end goal is that researchers have a readily...

  20. USQCD

    09 May 2024 | Science Gateways

    USQCD is a collaboration of US scientists developing and using large-scale computers for calculations in lattice quantum chromodynamics. Lattice QCD calculations allow us to understand the results of particle and nuclear physics experiments in terms of QCD, the...

  21. RADICAL Cybertools

    09 May 2024 | Science Gateways

    RADICAL Cybertools is an abstractions-based suite of well-defined capabilities that are architected for scalable, interoperable and sustainable approaches to support science on a range of high-performance and distributed computing systems. It currently...

  22. Cloudmesh Client Toolkit

    09 May 2024 | Science Gateways

    The cloudmesh client toolkit is a lightweight client interface of accessing heterogeneous clouds, clusters, and workstations right from the users computer. The user can manage his own set of resources he would like to utilize. Thus the user has the freedom to...

  23. Tripal

    09 May 2024 | Science Gateways

    Tripal is a toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and is a member of the GMOD family of tools. Tripal provides by default integration with the GMOD Chado database schema and Drupal, a popular Content...

  24. Dataverse - Open source research data repository software

    09 May 2024 | Science Gateways

    Dataverse is an open source web application to share, preserve, cite, explore, and analyze research data. It facilitates making data available to others, and allows you to replicate others' work more easily. Researchers, journals, data authors, publishers, data...

  25. Code Ocean

    09 May 2024 | Science Gateways

    Code Ocean is a cloud-based computational reproducibility platform that provides researchers and developers an easy way to share, discover and run code published in academic journals and conferences.