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ADCIRC
09 May 2024
ADCIRC is a system of computer programs for solving time dependent, free surface circulation and transport problems in two and three dimensions. These programs utilize the finite element method in space allowing the use of highly flexible, unstructured grids. Typical...
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Amber
09 May 2024
Amber is a suite of biomolecular simulation programs. The term "Amber" refers to two things. First, it is a set of molecular mechanical force fields for the simulation of biomolecules (these force fields are in the public domain, and are used in a variety of...
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Apache Airavata
09 May 2024
Apache Airavata is a software framework that enables you to compose, manage, execute, and monitor large scale applications and workflows on distributed computing resources such as local clusters, supercomputers,computational grids, and computing clouds.
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AtlanticWave-Software Defined Exchange (SDX)
09 May 2024
AtlanticWave-Software Defined Exchange (SDX) is a distributed intercontinental experimental SDX, supporting research, experimental deployments, prototyping and interoperability testing, on national and international scales.
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ATLAS@Home
09 May 2024
ATLAS@Home is a research project that uses volunteer computing to run simulations of the ATLAS experiment at CERN. You can participate by downloading and running a free program on your computer.
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BOINC: Compute for Science
09 May 2024
BOINC lets you help cutting-edge science research using your computer (Windows, Mac, Linux) or Android device. BOINC downloads scientific computing jobs to your computer and runs them invisibly in the background. It's easy and safe. About 30 science projects use...
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Brown Dog
09 May 2024
Brown Dog's goal is to prototype a highly distributed and extensible science driven Data Transformation Service (DTS). As a component of a national research cyberinfrastructure Brown Dog aims at making past and present research data more accessible and more useful to...
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BUSCO
09 May 2024
BUSCO v3 provides quantitative measures for the assessment of genome assembly, gene set, and transcriptome completeness, based on evolutionarily-informed expectations of gene content from near-universal single-copy orthologs selected from OrthoDB v9.
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C++Explorer
09 May 2024
This repo builds a JupyterHub/Jupyter notebook server which offers an interactive C++ experience. The primary interface for this is through cling notebooks (cling is the C++ interpreter). We extend the cling notebook with certain magics, (namely %%writefile and...
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Cactus Code
09 May 2024
Cactus provides computational scientists and engineers with a collaborative, modular and portable programming environment for parallel high performance computing. Cactus can make use of many other technologies for HPC, such as Samrai, HDF5, PETSc and PAPI, and...
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CANARIE's Research Platforms
09 May 2024
The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.
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CILogon
09 May 2024
CILogon provides an integrated open source identity and access management platform for research collaborations, combining federated identity management (Shibboleth, InCommon) with collaborative organization management (COmanage). Federated identity management enables...
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Cloudmesh Client Toolkit
09 May 2024
The cloudmesh client toolkit is a lightweight client interface of accessing heterogeneous clouds, clusters, and workstations right from the users computer. The user can manage his own set of resources he would like to utilize. Thus the user has the freedom to...
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Clowder
09 May 2024
Clowder is a research data management system designed to support any data format and multiple research domains. The core software has been in development for the past five years with funding from a variety of sources. Clowder is open source software and we are always...
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Code Ocean
09 May 2024
Code Ocean is a cloud-based computational reproducibility platform that provides researchers and developers an easy way to share, discover and run code published in academic journals and conferences.
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CyberGIS Toolkit
09 May 2024
CyberGIS Toolkit is a suite of loosely coupled open-source geospatial software components that provide computationally scalable spatial analysis and modeling capabilities enabled by advanced cyberinfrastructure. CyberGIS Toolkit represents a deep approach to CyberGIS...
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Cyclus
09 May 2024
Cyclus is the next-generation agent-based nuclear fuel cycle simulator, providing flexibility to users and developers through a dynamic resource exchange solver and plug-in, user-developed agent framework. The goal of Cyclus is to enable a broad spectrum of fuel...
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CyVerse
09 May 2024
CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...
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Data Wolf
09 May 2024
Data Wolf is designed to facilitate the documentation and dissemination of scientific work with a system that makes it easy to create and share workflows while separating the science from the logistics of execution. This allows scientists to focus on research without...
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DataConservancy (DC)
09 May 2024
The Data Conservancy (DC) was launched through a grant from the National Science Foundation’s DataNet program, which built upon prior experience with managing data from the Sloan Digital Sky Survey. The grant provided the DC team an opportunity to broaden its data...
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Dataverse - Open source research data repository software
09 May 2024
Dataverse is an open source web application to share, preserve, cite, explore, and analyze research data. It facilitates making data available to others, and allows you to replicate others' work more easily. Researchers, journals, data authors, publishers, data...
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Drupal
09 May 2024
Drupal is content management software. It's used to make many of the websites and applications you use every day. Drupal has great standard features, like easy content authoring, reliable performance, and excellent security. But what sets it apart is its flexibility;...
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DSpace - open digital repository
09 May 2024
DSpace is the software of choice for academic, non-profit, and commercial organizations building open digital repositories. It preserves and enables easy and open access to all types of digital content including text, images, moving images, mpegs and data sets. ...
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e-Biogenouest
09 May 2024
e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...
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Earth Science Information Partners (ESIP)
09 May 2024
The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...