Einstein Toolkit

09 May 2024

The Einstein Toolkit is a community-driven software platform of core computational tools to advance and support research in relativistic astrophysics and gravitational physics. It aims to include any computational tool the fits into it's scope. Currently, a large...

ERGO

09 May 2024

Ergo, previously MAEviz, is an open-source project that helps reduce the time from discovery gap that exists between researchers, practitioners, and decision makers by integrating the latest research findings, most accurate data, and new methodologies into a single...

FutureGateway Framework

09 May 2024

The FutureGateway Framework is a software environment aiming to build quickly and securely well structured Science Gateways. It consists of a set of services, scripts and utilities aiming to ease the creation and the maintenance of their related ScienceGateays...

Galaxy Software Framework

09 May 2024 | Science Gateways

Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

GenApp

09 May 2024 | Science Gateways

GenApp is a tool that can help people with existing code generate stand alone applications and science gateways. GenApp gateway generation is based upon definition files. User supplied code is brought into GenApp by writing a definition file and modifying or wrapping...

Geodashboard

09 May 2024 | Science Gateways

The Geodashboard is geospatial dashboard for geo-temporal data streams.

GeoNode

09 May 2024 | Science Gateways

GeoNode is a web-based application and platform for developing geospatial information systems (GIS) and for deploying spatial data infrastructures (SDI).

Globus: Research data management simplified

09 May 2024 | Science Gateways

Globus is a secure, reliable research data management service. With Globus, you can move, share, publish & discover data via a single interface. Whether your files live on a supercomputer, lab cluster, tape archive, public cloud or your laptop, you can manage them...

HADDOCK (High Ambiguity Driven protein-protein DOCKing)

09 May 2024 | Science Gateways

HADDOCK (High Ambiguity Driven protein-protein DOCKing) is an information-driven flexible docking approach for the modeling of biomolecular complexes. HADDOCK distinguishes itself from ab-initio docking methods in the fact that it encodes information from identified...

INCA: Monitoring Tool

09 May 2024 | Science Gateways

Determining whether a Grid is up in the face of complex Grid software deployments can be difficult and depends on the types of applications and users that utilize it. By detailing a set of software, services, and features that should be available on a Grid in a...

iRODS

09 May 2024 | Science Gateways

The Integrated Rule Oriented Data System, iRODS, is open source data management software designed to manage data sets that are big, important, and complex. Hundreds of organizations worldwide use iRODS to control their records and research data. ...

Jupyter Notebook

09 May 2024 | Science Gateways

The Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include: data cleaning and transformation, numerical simulation, statistical modeling, data...

Keycloak - Open Source Identity and Access Management

09 May 2024 | Science Gateways

Keycloak is an open source Identity and Access Management solution aimed at modern applications and services. It makes it easy to secure applications and services with little to no code.

KnowEnG

09 May 2024 | Science Gateways

KnowEnG, The Knowledge Engine for Genomics, will transform the way biomedical researchers analyze their genome-wide data by integrating multiple analytical methods derived from the most advanced data mining and machine learning research. Embedded with the breadth of...

LearnSphere

09 May 2024 | Science Gateways

This project is creating a community software infrastructure, called LearnSphere, that supports sharing, analysis and collaboration across a wide variety of educational data. LearnSphere supports researchers as they improve their understanding of human learning. It...

Materials Data Curation System

09 May 2024 | Science Gateways

The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

Materials Data Facility (MDF)

09 May 2024 | Science Gateways

The Materials Data Facility (MDF) is set of data services built specifically to support materials science researchers. MDF consists of two synergistic services, data publication and data discovery (in development). The production-ready data publication service offers...

MDAnalysis

09 May 2024 | Science Gateways

MDAnalysis is an object-oriented python toolkit to analyze molecular dynamics trajectories generated by CHARMM, Gromacs, NAMD, LAMMPS, Amber or DL_POLY; it also reads other formats (e.g. PDB files and XYZ format trajectories; see the supported coordinate formats for...

MetaboLights

09 May 2024 | Science Gateways

MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

MultiPLX

09 May 2024 | Science Gateways

About the program: MultiPLX 2.1 is a tool for analyzing PCR primer compatibility and automatically finding optimal multiplexing (grouping) solution. It uses state-of-the-art nearest neighbour DNA binding thermodynamics to estimate possible unwanted...

MyProxy

09 May 2024 | Science Gateways

MyProxy is open source software for managing X.509 Public Key Infrastructure (PKI) security credentials (certificates and private keys). MyProxy combines an online credential repository with an online certificate authority to allow users to securely obtain...

NCAR Digital Asset Services Hub (DASH)

09 May 2024 | Science Gateways

It is a centralized system for searching and discovering of digital scientific assets across NCAR and UCAR Community Programs, including datasets, publications, software, and models. The Data Management Plan is required for submitting or depositing your digital...

NDS Lab Workbench

09 May 2024 | Science Gateways

The Labs Workbench is: 1. An environment for development, integration, and experimentation with research data management and analysis tools and services in support of the NDS vision.. 2. A cloud-based computation and storage resource. 3. A scalable platform for...

NEWT(NERSC Web Toolkit)

09 May 2024 | Science Gateways

NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

ODM2(Observations Data Model 2)

09 May 2024 | Science Gateways

ODM2 is an information model and supporting software ecosystem for feature-based earth observations, designed to facilitate interoperability across scientific disciplines and domain cyberinfrastructures. For example, a single ODM2 database can readily integrate...