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  1. WINGS

    09 May 2024

    WINGS is a semantic workflow system that assists scientists with the design of computational experiments. A computational experiment specifies how selected datasets are to be processed by a series of software components in a particular configuration. Earth scientists...

  2. ARP/wARP 8.0

    09 May 2024

    ARP/wARP is a software project for automated protein model building and refinement. ARP/wARP combines pattern recognition-based interpretation of an electron density, its modelling as a hybrid model and a maximum likelihood parameter refinement with REFMAC.

  3. SLATE and the Mobility of Capability

    09 May 2024

    SLATE (Services Layer at the Edge) is a new project that, when complete, will implement “cyberinfrastructure as code” by augmenting the canonical Science DMZ pattern with a generic, programmable, secure and trusted underlayment platform.

  4. Open OnDemand

    09 May 2024

    Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

  5. Materials Data Curation System

    09 May 2024 | Science Gateways

    The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

  6. MetaboLights

    09 May 2024 | Science Gateways

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  7. MicroScope

    09 May 2024 | Science Gateways

    MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

  8. BUSCO

    09 May 2024 | Science Gateways

    BUSCO v3 provides quantitative measures for the assessment of genome assembly, gene set, and transcriptome completeness, based on evolutionarily-informed expectations of gene content from near-universal single-copy orthologs selected from OrthoDB v9.

  9. PHYLOViZ

    09 May 2024 | Science Gateways

    PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

  10. Galaxy Software Framework

    09 May 2024 | Science Gateways

    Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

  11. Suave

    09 May 2024 | Science Gateways

    The project is currently funded by National Science Foundation under award ACI-1443082 “EAGER: Development of a Novel Online Visual Survey Data Analysis Tool and Assessment of its Capabilities to Enhance Learning of Quantitative Research Methods

  12. SETI@Home

    09 May 2024 | Science Gateways

    SETI@home is a scientific experiment, based at UC Berkeley, that uses Internet-connected computers in the Search for Extraterrestrial Intelligence (SETI). You can participate by running a free program that downloads and analyzes radio telescope data.

  13. Compute Canada

    09 May 2024 | Science Gateways

    Compute Canada enables Canadian researchers to perform world-class research using Advanced Research Computing (ARC) strategies. The organization helps researchers who need ARC in all disciplines and at all scales; from individual researchers to some of the largest...

  14. LegumeIP

    09 May 2024 | Science Gateways

    LegumeIP is an integrative database and bioinformatics platform for comparative genomics and transcriptomics to facilitate the study of gene function and genome evolution in legumes,to understand mechanisms that are fundamental to the legume species, especially the...

  15. GnpIS(Genetic and Genomic Information System)

    09 May 2024 | Science Gateways

    The tool allows plant scientists or breeders to get associations values between traits and markers obtained in several association studies. Several filters are available to refine the query, such as the species, trait (s), or marker (s) or panel of germplasms. The...

  16. cdmHUB

    09 May 2024 | Science Gateways

    cdmHUB is the premier online portal for composites resources, information, and networking. We host a rapidly growing collection of composites apps and commercial tools that run in the cloud and are accessible through a web browser. cdmHUB also provides...

  17. Omics

    09 May 2024 | Science Gateways

    The RDS Omics project is an RDS-funded flagship project to provide cloud-based data services and tools for Australian Life Science Researchers to combine, analyse and interpret genomic (DNA), transcriptomic (RNA), proteomic (proteins) and metabolomic (small...

  18. OMICTools

    09 May 2024 | Science Gateways

    OMICtools is the first community search platform offering an intuitive search experience to retrieve biological data analysis tools. Connect with users to share and discuss tools. Bridge the gap between life science and computational biology.

  19. CTD² Data Portal

    09 May 2024 | Science Gateways

    CTD2 bridges the gap between the enormous volumes of data generated by genomic characterization studies and the ability to use these data for the development of human cancer therapeutics. It specializes in computational and functional genomics approaches critical for...

  20. iNquiry

    09 May 2024 | Science Gateways

    The iNquiry is a BioTeam production. BioTeam is a high-performance consulting practice. We are dedicated to delivering objective, technology agnostic solutions to life science researchers. We leverage the right technologies customized to our clients unique needs in...

  21. Wheat3BMine

    09 May 2024 | Science Gateways

    Wheat3BMine is a data warehouse dedicated to wheat 3B chromosome. It is developed using InterMine technology, providing a fast, flexible and user friendly access to integrated data by multiple ways: a browser, a query builder and a region search tool. Wheat3BMine...

  22. IGSR: The International Genome Sample Resource

    09 May 2024 | Science Gateways

    The goal of the 1000 Genomes Project was to find most genetic variants with frequencies of at least 1% in the populations studied.

  23. MyGeoHub

    09 May 2024 | Science Gateways

    This hub supports the geospatial modeling, data analysis and visualization needs of the broad research and education communities through hosting of groups, datasets, tools, training materials, and educational contents.

  24. NEWT(NERSC Web Toolkit)

    09 May 2024 | Science Gateways

    NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

  25. ORCA (Open Resource Control Architecture)

    09 May 2024 | Science Gateways

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...