Skip to main content

Resources: All

Find a resource
  1. collaboration x
  2. softwareentry x
  3. data x
  1. WINGS

    09 May 2024

    WINGS is a semantic workflow system that assists scientists with the design of computational experiments. A computational experiment specifies how selected datasets are to be processed by a series of software components in a particular configuration. Earth scientists...

  2. ARP/wARP 8.0

    09 May 2024

    ARP/wARP is a software project for automated protein model building and refinement. ARP/wARP combines pattern recognition-based interpretation of an electron density, its modelling as a hybrid model and a maximum likelihood parameter refinement with REFMAC.

  3. SLATE and the Mobility of Capability

    09 May 2024

    SLATE (Services Layer at the Edge) is a new project that, when complete, will implement “cyberinfrastructure as code” by augmenting the canonical Science DMZ pattern with a generic, programmable, secure and trusted underlayment platform.

  4. Open OnDemand

    09 May 2024

    Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

  5. Materials Data Curation System

    09 May 2024 | Science Gateways

    The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

  6. Citizen Science Alliance

    09 May 2024 | Science Gateways

    The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

  7. MetaboLights

    09 May 2024 | Science Gateways

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  8. BUSCO

    09 May 2024 | Science Gateways

    BUSCO v3 provides quantitative measures for the assessment of genome assembly, gene set, and transcriptome completeness, based on evolutionarily-informed expectations of gene content from near-universal single-copy orthologs selected from OrthoDB v9.

  9. PHYLOViZ

    09 May 2024 | Science Gateways

    PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

  10. Galaxy Software Framework

    09 May 2024 | Science Gateways

    Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

  11. Suave

    09 May 2024 | Science Gateways

    The project is currently funded by National Science Foundation under award ACI-1443082 “EAGER: Development of a Novel Online Visual Survey Data Analysis Tool and Assessment of its Capabilities to Enhance Learning of Quantitative Research Methods

  12. Earth Science Information Partners (ESIP)

    09 May 2024 | Science Gateways

    The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

  13. Earth Science Information Partners (ESIP)

    09 May 2024 | Science Gateways

    The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

  14. Citizen Science Alliance

    09 May 2024 | Science Gateways

    The CSA is a collaboration of scientists, software developers and educators who collectively develop, manage and utilise internet-based citizen science projects in order to further science itself, and the public understanding of both science and of the scientific...

  15. Manylabs

    09 May 2024 | Science Gateways

    Manylabs is a community hacker space or open science and Education. We hold public events and provide a residency program for people working on their own projects

  16. CitSci.org

    09 May 2024 | Science Gateways

    We support your citizen science. At CitSci.org, you create your own projects where trained volunteers and scientists together answer local, regional, and global questions, inform natural resource decisions, advance scientific understanding, and improve environmental...

  17. DataOne

    09 May 2024 | Science Gateways

    DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

  18. DataCenterHub

    09 May 2024 | Science Gateways

    This hub allows for the organization, preservation, and sharing of scientific and engineering data.

  19. MyGeoHub

    09 May 2024 | Science Gateways

    This hub supports the geospatial modeling, data analysis and visualization needs of the broad research and education communities through hosting of groups, datasets, tools, training materials, and educational contents.

  20. NEWT(NERSC Web Toolkit)

    09 May 2024 | Science Gateways

    NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

  21. nectar

    09 May 2024 | Science Gateways

    The National eResearch Collaboration Tools and Resources project (Nectar) provides an online infrastructure that supports researchers to connect with colleagues in Australia and around the world, allowing them to collaborate and share ideas and research outcomes,...

  22. ORCA (Open Resource Control Architecture)

    09 May 2024 | Science Gateways

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  23. OSiRIS - Open Storage Research Infrastructure

    09 May 2024 | Science Gateways

    OSiRIS has storage resources at Wayne State University, Michigan State University, and University of Michigan. We can store data spread across all three sites or target storage resources at a subset of the sites. The end goal is that researchers have a readily...

  24. USQCD

    09 May 2024 | Science Gateways

    USQCD is a collaboration of US scientists developing and using large-scale computers for calculations in lattice quantum chromodynamics. Lattice QCD calculations allow us to understand the results of particle and nuclear physics experiments in terms of QCD, the...

  25. RADICAL Cybertools

    09 May 2024 | Science Gateways

    RADICAL Cybertools is an abstractions-based suite of well-defined capabilities that are architected for scalable, interoperable and sustainable approaches to support science on a range of high-performance and distributed computing systems. It currently...