INCA: Monitoring Tool

09 May 2024

Determining whether a Grid is up in the face of complex Grid software deployments can be difficult and depends on the types of applications and users that utilize it. By detailing a set of software, services, and features that should be available on a Grid in a...

Pegasus

09 May 2024

The Pegasus project encompasses a set of technologies that help workflow-based applications execute in a number of different environments including desktops, campus clusters, grids, and clouds. Pegasus bridges the scientific domain and the execution environment by...

SoyBase

09 May 2024

SoyBase database was established in the 1990s as the USDA Soybean Genetics Database. Originally, it contained only genetic information about soybeans such as genetic maps and information about the Mendelian genetics of soybean. In time SoyBase was expanded to include...

GenApp

09 May 2024

GenApp is a tool that can help people with existing code generate stand alone applications and science gateways. GenApp gateway generation is based upon definition files. User supplied code is brought into GenApp by writing a definition file and modifying or wrapping...

Terra: the EOS Flagship

09 May 2024

Terra explores the connections between Earth's atmosphere, land, snow and ice, ocean, and energy balance to understand Earth's climate and climate change and to map the impact of human activity and natural disasters on communities and ecosystems.

Medicago truncatula genome database

09 May 2024

Medicago truncatula, a close relative of alfalfa, is a preeminent model for the study of the processes of nitrogen fixation, symbiosis, and legume genomics. The sequencing project was initiated with a generous grant from Samuel Roberts Noble Foundation (link is...

Open OnDemand

09 May 2024

Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

MicroScope

09 May 2024 | Science Gateways

MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

Reactome

09 May 2024 | Science Gateways

REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome...

OMA

09 May 2024 | Science Gateways

The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes.

Galaxy Software Framework

09 May 2024 | Science Gateways

Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

Suave

09 May 2024 | Science Gateways

The project is currently funded by National Science Foundation under award ACI-1443082 “EAGER: Development of a Novel Online Visual Survey Data Analysis Tool and Assessment of its Capabilities to Enhance Learning of Quantitative Research Methods

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

Manylabs

09 May 2024 | Science Gateways

Manylabs is a community hacker space or open science and Education. We hold public events and provide a residency program for people working on their own projects

CitSci.org

09 May 2024 | Science Gateways

We support your citizen science. At CitSci.org, you create your own projects where trained volunteers and scientists together answer local, regional, and global questions, inform natural resource decisions, advance scientific understanding, and improve environmental...

EarthCube

09 May 2024 | Science Gateways

EarthCube was initiated by the National Science Foundation (NSF) in 2011 to transform geoscience research by developing cyberinfrastructure to improve access, sharing, visualization, and analysis of all forms of geosciences data and related resources. As a...

DataOne

09 May 2024 | Science Gateways

DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

DataOne

09 May 2024 | Science Gateways

DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

HRGRN

09 May 2024 | Science Gateways

We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

The Earth System Grid (ESG)

09 May 2024 | Science Gateways

The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the global climate change research community. The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the...

DataCenterHub

09 May 2024 | Science Gateways

This hub allows for the organization, preservation, and sharing of scientific and engineering data.

The Triticeae Toolbox (T3)

09 May 2024 | Science Gateways

T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

VEP

09 May 2024 | Science Gateways

VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

Vega

09 May 2024 | Science Gateways

Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.