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HADDOCK (High Ambiguity Driven protein-protein DOCKing)

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Abstract

HADDOCK (High Ambiguity Driven protein-protein DOCKing) is an information-driven flexible docking approach for the modeling of biomolecular complexes. HADDOCK distinguishes itself from ab-initio docking methods in the fact that it encodes information from identified or predicted protein interfaces in ambiguous interaction restraints (AIRs) to drive the docking process. HADDOCK can deal with a large class of modeling problems including protein-protein, protein-nucleic acids and protein-ligand complexes.

Citation

G.C.P van Zundert, J.P.G.L.M. Rodrigues, M. Trellet, C. Schmitz, P.L. Kastritis, E. Karaca, A.S.J. Melquiond, M. van Dijk, S.J. de Vries and A.M.J.J. Bonvin. "The HADDOCK2.2 webserver: User-friendly integrative modeling of biomolecular complexes." J. Mol. Biol., 428, 720-725 (2016).

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a.m.j.j.bonvin@uu.nl

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Researchers should cite this work as follows:

  • (2024), "HADDOCK (High Ambiguity Driven protein-protein DOCKing)," https://sciencegateways.org/resources/haddockhighambiguitydrivenprotein-proteindocking.

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