ArrayExpress

09 May 2024

ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.

ATLAS@Home

09 May 2024

ATLAS@Home is a research project that uses volunteer computing to run simulations of the ATLAS experiment at CERN. You can participate by downloading and running a free program on your computer.

BamBam

09 May 2024 | Tools

BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...

Carbon Mapper

09 May 2024 | Science Gateways

Carbon Mapper’s goal is to help stakeholders visualize and understand the earth’s carbon cycle and related human activity and to seek feedback on how to improve data from monitoring systems.

CoGe(Comparative Genomics)

09 May 2024 | Science Gateways

CoGe is a platform for performing Comparative Genomics research. It provides an open-ended network of interconnected tools to manage, analyze, and visualize next-gen data.

CottonGen

09 May 2024 | Science Gateways

CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

Crops in silico

09 May 2024 | Science Gateways

Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

CTD² Data Portal

09 May 2024 | Science Gateways

CTD2 bridges the gap between the enormous volumes of data generated by genomic characterization studies and the ability to use these data for the development of human cancer therapeutics. It specializes in computational and functional genomics approaches critical for...

CyVerse

09 May 2024 | Science Gateways

CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...

DataOne

09 May 2024 | Science Gateways

DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

e-Biogenouest

09 May 2024 | Science Gateways

e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

EarthCube

09 May 2024 | Science Gateways

EarthCube was initiated by the National Science Foundation (NSF) in 2011 to transform geoscience research by developing cyberinfrastructure to improve access, sharing, visualization, and analysis of all forms of geosciences data and related resources. As a...

earthscope

09 May 2024 | Science Gateways

EarthScope is a program of the National Science Foundation (NSF) that has deployed thousands of seismic, GPS, and other geophysical instruments to study the structure and evolution of the North American continent and the processes that cause earthquakes and volcanic...

EVER-EST

09 May 2024 | Science Gateways

The EVER-EST project (European Virtual Environment for Research – Earth Science Themes: a solution ) will create a virtual research environment (VRE) focussed on the requirements of the Earth Science community. Within the earth sciences there are major challenges...

Genome Database for Rosaceae (GDR)

09 May 2024 | Science Gateways

The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...

GenomeSpace

09 May 2024 | Science Gateways

GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to...

Genomics Virtual Laboratory (GVL)

09 May 2024 | Science Gateways

The Genomics Virtual Laboratory (GVL) provides a cloud-based suite of genomics analysis tools for research and training.

Genomicus

09 May 2024 | Science Gateways

Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in...

GenSAS

09 May 2024 | Science Gateways

The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and...

GeoMapApp

09 May 2024 | Science Gateways

GeoMapApp is an earth science exploration and visualization application that is continually being expanded as part of the Marine Geoscience Data System (MGDS) at the Lamont-Doherty Earth Observatory of Columbia University. The application provides direct access to...

GnpIS(Genetic and Genomic Information System)

09 May 2024 | Science Gateways

The tool allows plant scientists or breeders to get associations values between traits and markers obtained in several association studies. Several filters are available to refine the query, such as the species, trait (s), or marker (s) or panel of germplasms. The...

HRGRN

09 May 2024 | Science Gateways

We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

IGSR: The International Genome Sample Resource

09 May 2024 | Science Gateways

The goal of the 1000 Genomes Project was to find most genetic variants with frequencies of at least 1% in the populations studied.