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  1. Wheat Tilling

    11 Sep 2019

    Wheat Target Induced Local Lesions In Genome (TILLING) project based on the tetraploid wheat line Triticum turgidum cv. Kronos. This project entails targeted re-sequencing of the protein coding regions of over 1500 EMS mutagenized individuals from the Kronos...

  2. TreeGenes

    11 Sep 2019

    TreeGenes is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest...

  3. GenSAS

    11 Sep 2019

    The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and...

  4. BamBam

    11 Sep 2019

    BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...

  5. Genomicus

    11 Sep 2019

    Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in...

  6. Genomics Virtual Laboratory (GVL)

    11 Sep 2019

    The Genomics Virtual Laboratory (GVL) provides a cloud-based suite of genomics analysis tools for research and training.

  7. Biodiversity and Climate Change Virtual Laboratory

    11 Sep 2019

    The Biodiversity and Climate Change Virtual Laboratory (BCCVL) is a “one stop modelling shop” that simplifies the process of biodiversity-climate change modelling.

  8. Genome Database for Rosaceae (GDR)

    11 Sep 2019

    The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...

  9. CLIPC: Constructing Europe's Climate Information Portal

    11 Sep 2019

    CLIPC provides access to climate information of direct relevance to a wide variety of users, catering for consultant advisers, policy makers, private sector decision makers and scientists, but also interested members of the general public. This one-stop-shop platform...

  10. Understanding Sea Level

    11 Sep 2019

    Learn more about the different causes of sea level change and the scientific background of observations and projecting sea level. Find out about the history of measuring sea level and how state-of-the-art physical climate models predict sea level change into the...

  11. MCRN

    11 Sep 2019

    This hub specializes in collection of data on the study of climate change and mathematics of climate.

  12. HRGRN

    11 Sep 2019

    We developed HRGRN, a Graph search-empowered integrative database of Arabidopsis signaling transduction, metabolism, and gene regulation networks, with an emphasis on hormone signaling and gene regulatory pathways. The database is designed to host and discover...

  13. The Earth System Grid (ESG)

    11 Sep 2019

    The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the global climate change research community. The Earth System Grid (ESG) a DOE SciDAC sponsored project, provides access to data, models, and tools for the...

  14. GLOBE

    11 Sep 2019

    GLOBE (Global Collaboration Engine) is an online collaborative environment that enables land change researchers to share, compare and integrate local and regional studies with global data to assess the global relevance of their work.

  15. The Triticeae Toolbox (T3)

    11 Sep 2019

    T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

  16. VEP

    11 Sep 2019

    VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

  17. Vega

    11 Sep 2019

    Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

  18. NCBI Genome Workbench

    11 Sep 2019

    Genome Workbench offers researchers a rich set of integrated tools for studying and analyzing genetic data. Users can explore and compare data from multiple sources including the NCBI databases or the user’s own private data. Data analysis in Genome Workbench is...

  19. Spatial Portal for Analysis of Climatic Effects on Species (SPACES)

    11 Sep 2019

    The Spatial Portal for Analysis of Climatic Effects on Species (SPACES) allows anyone to design and run niche modeling experiments on any species with occurrence data in the well-known GBIF database. You select the species, climate layers and algorithms to run and we...

  20. Physical Oceanography Distributed Active Archive Center (PO.DAAC)

    11 Sep 2019

    The mission of the PO.DAAC is to preserve NASA’s ocean and climate data and make these universally accessible and meaningful.

  21. CottonGen

    11 Sep 2019

    CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

  22. Crops in silico

    11 Sep 2019

    Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

  23. SwissRegulon Portal

    11 Sep 2019

    A repository of computational biology tools and databases developed by the van Nimwegen lab

  24. PeanutBase

    11 Sep 2019

    This web portal is designed to provide convenient access to peanut genetic and genomic data deriving from U.S. and international research, and particularly from the Peanut Genomics Initiative: The U.S. industry has embarked on an ambitious plan to map the peanut...

  25. SoyBase

    11 Sep 2019

    SoyBase database was established in the 1990s as the USDA Soybean Genetics Database. Originally, it contained only genetic information about soybeans such as genetic maps and information about the Mendelian genetics of soybean. In time SoyBase was expanded to include...