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  1. OpenTopography

    16 Mar 2021

    OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources. OpenTopography is supported by the National Science Foundation under Award Numbers 1948997, 1948994 & 1948857.

  2. The Agave Platform

    05 Oct 2020

    The Agave Platform is an open source, Science-as-a-Service solution for hybrid cloud computing. It provides a collection of RESTful web services that covering everything from standards-based authentication and authorization to computational, data, and...

  3. Whole Tale

    27 Feb 2020

    Merging Science and Cyberinfrastructure PathwayWhole Tale is an NSF-funded Data Infrastructure Building Block (DIBBS) initiative to build a scalable, open source, web-based, multi-user platform for reproducible research enabling the creation,...

  4. GeoMapApp

    11 Sep 2019

    GeoMapApp is an earth science exploration and visualization application that is continually being expanded as part of the Marine Geoscience Data System (MGDS) at the Lamont-Doherty Earth Observatory of Columbia University. The application provides direct access to...

  5. Plant Genomics

    11 Sep 2019

    Plant genomics is a simple expansion of the scope of genomics at the National Center for Biotechnology Information (NCBI). NCBI provides the tools for storage of and analysis of nucleotide sequence such as, respectively, GenBank and BLAST and the capability to...

  6. CANARIE's Research Platforms

    11 Sep 2019

    The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.

  7. Multiscale Complex Genomics (MuG) Virtual Research Environment

    11 Sep 2019

    The MuG Virtual Research Environment supports the expanding 3D/4D genomics community by developing tools to integrate the navigation in genomics data from sequence to 3D/4D chromatin dynamics data.

  8. maizeGDB

    11 Sep 2019

    MaizeGDB (maize genetics and genomics database) is a community-oriented, long-term, federally funded informatics service to researchers focused on the crop plant and model organism Zea mays.

  9. NGSEP (Next Generation Sequencing Eclipse Plugin)

    11 Sep 2019

    NGSEP (Next Generation Sequencing Eclipse Plugin), an integrated framework for analysis of high throughput sequencing reads. The main functionality of NGSEP is the variants detector, which allows to make simultaneous discovery of SNVs, indels, and CNVs. NGSEP also...

  10. GenomeSpace

    11 Sep 2019

    GenomeSpace is a cloud-based interoperability framework to support integrative genomics analysis through an easy-to-use Web interface. GenomeSpace provides access to a diverse range of bioinformatics tools, and bridges the gaps between the tools, making it easy to...

  11. LegumeIP

    11 Sep 2019

    LegumeIP is an integrative database and bioinformatics platform for comparative genomics and transcriptomics to facilitate the study of gene function and genome evolution in legumes,to understand mechanisms that are fundamental to the legume species, especially the...

  12. GnpIS(Genetic and Genomic Information System)

    11 Sep 2019

    The tool allows plant scientists or breeders to get associations values between traits and markers obtained in several association studies. Several filters are available to refine the query, such as the species, trait (s), or marker (s) or panel of germplasms. The...

  13. Omics

    11 Sep 2019

    The RDS Omics project is an RDS-funded flagship project to provide cloud-based data services and tools for Australian Life Science Researchers to combine, analyse and interpret genomic (DNA), transcriptomic (RNA), proteomic (proteins) and metabolomic (small...

  14. OMICTools

    11 Sep 2019

    OMICtools is the first community search platform offering an intuitive search experience to retrieve biological data analysis tools. Connect with users to share and discuss tools. Bridge the gap between life science and computational biology.

  15. CTD² Data Portal

    11 Sep 2019

    CTD2 bridges the gap between the enormous volumes of data generated by genomic characterization studies and the ability to use these data for the development of human cancer therapeutics. It specializes in computational and functional genomics approaches critical for...

  16. iNquiry

    11 Sep 2019

    The iNquiry is a BioTeam production. BioTeam is a high-performance consulting practice. We are dedicated to delivering objective, technology agnostic solutions to life science researchers. We leverage the right technologies customized to our clients unique needs in...

  17. Diagrid

    11 Sep 2019

    Allows science software to be run through a web browser

  18. Wheat3BMine

    11 Sep 2019

    Wheat3BMine is a data warehouse dedicated to wheat 3B chromosome. It is developed using InterMine technology, providing a fast, flexible and user friendly access to integrated data by multiple ways: a browser, a query builder and a region search tool. Wheat3BMine...

  19. IGSR: The International Genome Sample Resource

    11 Sep 2019

    The goal of the 1000 Genomes Project was to find most genetic variants with frequencies of at least 1% in the populations studied.

  20. Coherent X-ray Imaging Data Bank (CXIDB)

    11 Sep 2019

    Nowadays there are several groups around the world doing excellent work using different kinds of techniques all based on the physics of coherent X-ray imaging (CXI). Due to several reasons, including lack of a standard file format, there has been limited sharing of...

  21. PHARMACOLOGY

    11 Sep 2019

    One of the main aims is to provide a searchable database with quantitative information on drug targets and the prescription medicines and experimental drugs that act on them. The information in the database is presented at two levels: the initial view or landing...

  22. ORCA (Open Resource Control Architecture)

    11 Sep 2019

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  23. ChEMBL

    11 Sep 2019

    ChEMBL is a database of bioactive drug-like small molecules, it contains 2-D structures, calculated properties (e.g. logP, Molecular Weight, Lipinski Parameters, etc.) and abstracted bioactivities (e.g. binding constants, pharmacology and ADMET data). The data is...

  24. SciServer

    11 Sep 2019

    SciServer is a collaborative research environment for data-intensive science. It offers tools for querying and managing Petabyte-scale datasets, including a browser-based Jupyter notebook interface for computation and visualization. SciServer is a general-purpose...

  25. ArrayExpress

    11 Sep 2019

    ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.