Neotoma Paleoecology Database

09 May 2024

Neotoma Paleoecology Database and Community is an online hub for data, research, education, and discussion about paleoenvironments. Anyone with an Internet connection can access Neotoma.

Paleobiology Database (PBDB)

09 May 2024

The Paleobiology Database is a public database of paleontological data that anyone can use, maintained by an international non-governmental group of paleontologists. You can explore the data online in the Navigator, which lets you filter fossil occurrences by time,...

ODM2(Observations Data Model 2)

09 May 2024

ODM2 is an information model and supporting software ecosystem for feature-based earth observations, designed to facilitate interoperability across scientific disciplines and domain cyberinfrastructures. For example, a single ODM2 database can readily integrate...

BioFragment Database (BFDb)

09 May 2024

The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

DipCheck

09 May 2024

DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

MetaboLights

09 May 2024

MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

BRENDA

09 May 2024

BRENDA is the main collection of enzyme functional data available to the scientific community.

CAZY

09 May 2024

The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

IntAct Molecular Interaction Database

09 May 2024

IntAct provides a freely available, open source database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.

IntEnz

09 May 2024

IntEnz (Integrated relational Enzyme database) is a freely available resource focused on enzyme nomenclature. IntEnz is created in collaboration with the Swiss Institute of Bioinformatics (SIB). This collaboration is responsible for the production of the ENZYME...

MicroScope

09 May 2024 | Science Gateways

MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

Reactome

09 May 2024 | Science Gateways

REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome...

Rhea

09 May 2024 | Science Gateways

Rhea is an expert curated resource of biochemical reactions designed for the annotation of enzymes and genome-scale metabolic networks and models.

UniProt

09 May 2024 | Science Gateways

The mission of UniProt is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequence and functional information.

OMA

09 May 2024 | Science Gateways

The OMA (“Orthologous MAtrix”) project is a method and database for the inference of orthologs among complete genomes.

Phylogeny.fr

09 May 2024 | Science Gateways

Phylogeny.fr has been designed to provide a high performance platform that transparently chains programs relevant to phylogenetic analysis in a comprehensive, and flexible pipeline. Although phylogenetic aficionados will be able to find most of their favorite tools...

Citizen Science

09 May 2024 | Science Gateways

Citizen science is the involvement of the public in scientific research – whether community-driven research or global investigations. The Citizen Science Association unites expertise from educators, scientists, data managers, and others to power citizen science. Join...

Center for Open Science

09 May 2024 | Science Gateways

Our mission is to provide expertise, tools, and training to help researchers create and promote open science within their teams and institutions. Promoting these practices within the research funding and publishing communities accelerates scientific progress

VRE4EIC

09 May 2024 | Science Gateways

The VRE4EIC project addresses key data and software challenges in supporting multidisciplinary data driven sciences

CitSci.org

09 May 2024 | Science Gateways

We support your citizen science. At CitSci.org, you create your own projects where trained volunteers and scientists together answer local, regional, and global questions, inform natural resource decisions, advance scientific understanding, and improve environmental...

HABRI Central

09 May 2024 | Science Gateways

HABRI Central is an online platform for open research and collaboration into the relationships between humans and animals, specifically companion animals. HABRI Central uses a combination of library resources to facilitate the discovery, access, production, and...

InterRidge Vents Database

09 May 2024 | Science Gateways

InterRidge Vents Database is to provide a comprehensive list of active submarine hydrothermal vent fields for use in academic research and education.

cdmHUB

09 May 2024 | Science Gateways

cdmHUB is the premier online portal for composites resources, information, and networking. We host a rapidly growing collection of composites apps and commercial tools that run in the cloud and are accessible through a web browser. cdmHUB also provides...

vHUB

09 May 2024 | Science Gateways

VHub is an online resource for collaboration in volcanology research and risk mitigation. VHub provides easy mechanisms for sharing tools to model volcanic processes and analyze volcano data, to share resources such as teaching materials and workshops, and to...

Molecular Space

09 May 2024 | Science Gateways

The Clean Energy Project (CEP) is a virtual high-throughput discovery and design effort for the next generation of plastic solar cell materials. We study millions of candidate structures to identify suitable compounds for the harvesting of renewable energy from the...