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  1. INCA: Monitoring Tool

    09 May 2024

    Determining whether a Grid is up in the face of complex Grid software deployments can be difficult and depends on the types of applications and users that utilize it. By detailing a set of software, services, and features that should be available on a Grid in a...

  2. Pegasus

    09 May 2024

    The Pegasus project encompasses a set of technologies that help workflow-based applications execute in a number of different environments including desktops, campus clusters, grids, and clouds. Pegasus bridges the scientific domain and the execution environment by...

  3. Neotoma Paleoecology Database

    09 May 2024

    Neotoma Paleoecology Database and Community is an online hub for data, research, education, and discussion about paleoenvironments. Anyone with an Internet connection can access Neotoma.

  4. Paleobiology Database (PBDB)

    09 May 2024

    The Paleobiology Database is a public database of paleontological data that anyone can use, maintained by an international non-governmental group of paleontologists. You can explore the data online in the Navigator, which lets you filter fossil occurrences by time,...

  5. Social Media Macroscope

    09 May 2024

    The Social Media Macroscope is a project by University of Illinois Technology Services and the National Center for Supercomputing Applications (NCSA) with the goal of making social media data, analytics, and visualization tools accessible to researchers and students...

  6. ODM2(Observations Data Model 2)

    09 May 2024

    ODM2 is an information model and supporting software ecosystem for feature-based earth observations, designed to facilitate interoperability across scientific disciplines and domain cyberinfrastructures. For example, a single ODM2 database can readily integrate...

  7. Community Surface Dynamics Modeling System (CSDMS)

    09 May 2024

    CSDMS is an organization that promotes computational modeling of earth-surface processes by providing support for community, computing, and education. The Community Surface Dynamics Modeling System (CSDMS) deals with the Earth's surface - the ever-changing, dynamic...

  8. BioFragment Database (BFDb)

    09 May 2024

    The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

  9. GenApp

    09 May 2024

    GenApp is a tool that can help people with existing code generate stand alone applications and science gateways. GenApp gateway generation is based upon definition files. User supplied code is brought into GenApp by writing a definition file and modifying or wrapping...

  10. DipCheck

    09 May 2024

    DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

  11. EcologyPlus

    09 May 2024

    Our Mission: EcologyPlus connects diverse college students and early career scientists with timely and relevant career opportunities and a community of peers and professionals in ecology and related careers across all sectors.What is EcologyPlus? ...

  12. INTERACTIVE PARALLELIZATION TOOL (IPT)

    09 May 2024

    Interactive Parallelization Tool (IPT) assists domain-­experts and students in efficiently parallelizing their existing C/C++ applications using any of the following parallel programming models: Message Passing Interface (MPI), OpenMP, CUDA, and hybrid programming....

  13. 3DEM (3-D ELECTRON MICROSCOPY)

    09 May 2024

    A web-based research platform focused on developing and disseminating new technologies for enhanced resolution 3-dimensional electron microscopy.

  14. Chem Compute

    09 May 2024 | Science Gateways

    The Chem Compute website allows students to easily access state of the art computational software for free. Our hope is that this will enable faculty to incorporate computational chemistry into their undergraduate teaching and research curriculum without the hassle...

  15. Open OnDemand

    09 May 2024 | Science Gateways

    Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

  16. MetaboLights

    09 May 2024 | Science Gateways

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  17. BRENDA

    09 May 2024 | Science Gateways

    BRENDA is the main collection of enzyme functional data available to the scientific community.

  18. CAZY

    09 May 2024 | Science Gateways

    The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

  19. IntAct Molecular Interaction Database

    09 May 2024 | Science Gateways

    IntAct provides a freely available, open source database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.

  20. IntEnz

    09 May 2024 | Science Gateways

    IntEnz (Integrated relational Enzyme database) is a freely available resource focused on enzyme nomenclature. IntEnz is created in collaboration with the Swiss Institute of Bioinformatics (SIB). This collaboration is responsible for the production of the ENZYME...

  21. MicroScope

    09 May 2024 | Science Gateways

    MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

  22. MicroScope

    09 May 2024 | Science Gateways

    MicroScope is a web-based platform for microbial comparative genome analysis and manual functional annotation.

  23. Reactome

    09 May 2024 | Science Gateways

    REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome...

  24. Rhea

    09 May 2024 | Science Gateways

    Rhea is an expert curated resource of biochemical reactions designed for the annotation of enzymes and genome-scale metabolic networks and models.

  25. UniProt

    09 May 2024 | Science Gateways

    The mission of UniProt is to provide the scientific community with a comprehensive, high-quality and freely accessible resource of protein sequence and functional information.