Skip to main content

Resources: All

Find a resource
  1. sgciaffiliate x
  2. classroom x
  3. genome x
  1. IU Cyber Gateway

    09 May 2024

    IU Cybergateway provides IU users with easy job submissions to IU computing resources, BigRed2, Karst and Mason. Users can also monitor and manage running jobs in IU computing resources, share research experimental data with fellow researchers and can equest their...

  2. The Triticeae Toolbox (T3)

    09 May 2024

    T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

  3. VEP

    09 May 2024

    VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

  4. Vega

    09 May 2024

    Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

  5. USD Gateway

    09 May 2024

    This Science Gateway provides access to supercomputing resources without the complexity that often accompanies them. By using this site, you can focus on your computational research instead of fretting about complicated interfaces. The USD gateway is equipped to...

  6. Phasta Gateway

    09 May 2024

    `The Parallel Hierarchic Adaptive Stabilized Transient Analysis, PHASTA, the software supports modeling compressible or incompressible, laminar or turbulent, steady or unsteady flows in 3D, using unstructured grids. The PHASTA portal enables researchers to easily...

  7. Center for Academic Research and Training in Anthropogeny (CARTA)

    09 May 2024

    CARTA is a virtual organization formed in order to promote transdisciplinary research into human origins, drawing on methods from a number of traditional disciplines spanning the social, biomedical, biological, computational and engineering, physical and chemical...

  8. NCBI Genome Workbench

    09 May 2024

    Genome Workbench offers researchers a rich set of integrated tools for studying and analyzing genetic data. Users can explore and compare data from multiple sources including the NCBI databases or the user’s own private data. Data analysis in Genome Workbench is...

  9. University of Utah Gateway

    09 May 2024

    The Center For High Performance Computing (CHPC) at University of Utah manages all supercomputing requirements of the university as well as its research collaborators. In addition to deploying and operating high-performance computational resources and providing...

  10. CottonGen

    09 May 2024

    CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

  11. Sci-GaIA

    09 May 2024

    Sci-GaiA aims at creating a sustainable foundation of educational materials and procedures for the development and management of Science Gateways and e–Infrastructures in Africa and beyond.

  12. The USA National Phenology Network (USA-NPN)

    09 May 2024

    The USA National Phenology Network was established in 2007 to collect, store, and share phenology data and information. It supports science, natural resource management, and communication by providing data, tools, and resources and by connecting people. It consists...

  13. Crops in silico

    09 May 2024

    Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

  14. Apache Airavata

    09 May 2024

    Apache Airavata is a software framework that enables you to compose, manage, execute, and monitor large scale applications and workflows on distributed computing resources such as local clusters, supercomputers,computational grids, and computing clouds.

  15. QUBEShub

    09 May 2024

    To improve learning opportunities for all students enrolled in undergraduate biology courses by reflecting the centrality of quantitative approaches in modern biology.

  16. SwissRegulon Portal

    09 May 2024

    A repository of computational biology tools and databases developed by the van Nimwegen lab

  17. DataHub

    09 May 2024

    DataHub is a cross-domain platform for preserving, sharing, and discovering data produced by scientific research. Datasets are organized by experiments or cases, with a simple common structure for metadata, file collections, and data tables containing measurements...

  18. PeanutBase

    09 May 2024

    This web portal is designed to provide convenient access to peanut genetic and genomic data deriving from U.S. and international research, and particularly from the Peanut Genomics Initiative: The U.S. industry has embarked on an ambitious plan to map the peanut...

  19. nanoHUB

    09 May 2024

    nanoHUB.org is the premier gateway for computational nanotechnology research, education, and collaboration. Our site hosts a rapidly growing collection of simulation tools for nanoscale phenomena that run in the cloud and are accessible through a web browser. In...

  20. Globus: Research data management simplified

    09 May 2024

    Globus is a secure, reliable research data management service. With Globus, you can move, share, publish & discover data via a single interface. Whether your files live on a supercomputer, lab cluster, tape archive, public cloud or your laptop, you can manage them...

  21. Anecdata.org

    09 May 2024

    Anecdata.org is a free online citizen science platform developed by the Community Lab at the MDI Biological Laboratory in Bar Harbor, Maine.Anecdata.org is used by hundreds of individuals and organizations to gather and access citizen science...

  22. Amos Gateway

    09 May 2024

    The overarching goal of the project is create a comprehensive cyberinfrastructure for the atomic, molecular, and optical science (AMOS) community where practitioners can access a synergistic, full-scope platform for computational AMOS. The developers...

  23. OpenTopography

    09 May 2024 | Science Gateways

    OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources. OpenTopography is supported by the National Science Foundation under Award Numbers 1948997, 1948994 & 1948857.

  24. OpenAltimetry

    09 May 2024 | Science Gateways

    OpenAltimetry is a cyberinfrastructure platform for discovery, access, and visualization of data from NASA’s ICESat and upcoming ICESat-2 laser altimeter missions. ICESat and ICESat-2 measure changes in the volume of Earth’s ice sheets, sea-ice thickness, sea-level...

  25. Sustainable Water through Integrated Modeling

    09 May 2024 | Science Gateways

    Scientific models of complex water resource systems help us understand and experiment with the behavior of those systems. Most scientific modeling today requires the use of software that can be hard to understand, expensive to build and maintain, and present little...