Skip to main content

Resources: All

Find a resource
  1. softwareentry x
  2. research x
  1. WINGS

    09 May 2024

    WINGS is a semantic workflow system that assists scientists with the design of computational experiments. A computational experiment specifies how selected datasets are to be processed by a series of software components in a particular configuration. Earth scientists...

  2. ARP/wARP 8.0

    09 May 2024

    ARP/wARP is a software project for automated protein model building and refinement. ARP/wARP combines pattern recognition-based interpretation of an electron density, its modelling as a hybrid model and a maximum likelihood parameter refinement with REFMAC.

  3. SLATE and the Mobility of Capability

    09 May 2024

    SLATE (Services Layer at the Edge) is a new project that, when complete, will implement “cyberinfrastructure as code” by augmenting the canonical Science DMZ pattern with a generic, programmable, secure and trusted underlayment platform.

  4. Open OnDemand

    09 May 2024

    Open OnDemand is an NSF-funded open-source HPC portal based on OSC’s original OnDemand portal. The goal of Open OnDemand is to provide an easy way for system administrators to provide web access to their HPC resources, including, but not limited to: ...

  5. Materials Data Curation System

    09 May 2024

    The NIST Materials Data Curation System (MDCS) provides a means for capturing, sharing, and transforming materials data into a structured format that is XML based amenable to transformation to other formats. The data are organized using user-selected templates...

  6. MetaboLights

    09 May 2024

    MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and...

  7. BUSCO

    09 May 2024

    BUSCO v3 provides quantitative measures for the assessment of genome assembly, gene set, and transcriptome completeness, based on evolutionarily-informed expectations of gene content from near-universal single-copy orthologs selected from OrthoDB v9.

  8. PHYLOViZ

    09 May 2024

    PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

  9. Galaxy Software Framework

    09 May 2024

    Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...

  10. Citizen Science

    09 May 2024

    Citizen science is the involvement of the public in scientific research – whether community-driven research or global investigations. The Citizen Science Association unites expertise from educators, scientists, data managers, and others to power citizen science. Join...

  11. Center for Open Science

    09 May 2024

    Our mission is to provide expertise, tools, and training to help researchers create and promote open science within their teams and institutions. Promoting these practices within the research funding and publishing communities accelerates scientific progress

  12. VRE4EIC

    09 May 2024

    The VRE4EIC project addresses key data and software challenges in supporting multidisciplinary data driven sciences

  13. CitSci.org

    09 May 2024

    We support your citizen science. At CitSci.org, you create your own projects where trained volunteers and scientists together answer local, regional, and global questions, inform natural resource decisions, advance scientific understanding, and improve environmental...

  14. HABRI Central

    09 May 2024

    HABRI Central is an online platform for open research and collaboration into the relationships between humans and animals, specifically companion animals. HABRI Central uses a combination of library resources to facilitate the discovery, access, production, and...

  15. cdmHUB

    09 May 2024

    cdmHUB is the premier online portal for composites resources, information, and networking. We host a rapidly growing collection of composites apps and commercial tools that run in the cloud and are accessible through a web browser. cdmHUB also provides...

  16. vHUB

    09 May 2024

    VHub is an online resource for collaboration in volcanology research and risk mitigation. VHub provides easy mechanisms for sharing tools to model volcanic processes and analyze volcano data, to share resources such as teaching materials and workshops, and to...

  17. e-Biogenouest

    09 May 2024

    e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

  18. DataCenterHub

    09 May 2024

    This hub allows for the organization, preservation, and sharing of scientific and engineering data.

  19. SmarterAgriculture

    09 May 2024

    This Smarter Agriculture™ platform will provide plant science researchers with a data management infrastructure that will organize data from many disparate streams in a cohesive way.

  20. NEWT(NERSC Web Toolkit)

    09 May 2024

    NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

  21. ORCA (Open Resource Control Architecture)

    09 May 2024

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  22. OSiRIS - Open Storage Research Infrastructure

    09 May 2024

    OSiRIS has storage resources at Wayne State University, Michigan State University, and University of Michigan. We can store data spread across all three sites or target storage resources at a subset of the sites. The end goal is that researchers have a readily...

  23. USQCD

    09 May 2024

    USQCD is a collaboration of US scientists developing and using large-scale computers for calculations in lattice quantum chromodynamics. Lattice QCD calculations allow us to understand the results of particle and nuclear physics experiments in terms of QCD, the...

  24. RADICAL Cybertools

    09 May 2024

    RADICAL Cybertools is an abstractions-based suite of well-defined capabilities that are architected for scalable, interoperable and sustainable approaches to support science on a range of high-performance and distributed computing systems. It currently...

  25. Cloudmesh Client Toolkit

    09 May 2024

    The cloudmesh client toolkit is a lightweight client interface of accessing heterogeneous clouds, clusters, and workstations right from the users computer. The user can manage his own set of resources he would like to utilize. Thus the user has the freedom to...