Skip to main content

Resources: All

Find a resource
  1. VESTA

    11 Sep 2019

    VESTA is a timeline based annotation platform of multimedia content. It offers an integrated set of innovative computer tools for analyzing and annotating audio and video recordings. These tools allows to significantly accelerate, and in some cases, automate the...

  2. Wheat3BMine

    11 Sep 2019

    Wheat3BMine is a data warehouse dedicated to wheat 3B chromosome. It is developed using InterMine technology, providing a fast, flexible and user friendly access to integrated data by multiple ways: a browser, a query builder and a region search tool. Wheat3BMine...

  3. VEP

    11 Sep 2019

    VEP (Variant Effect Predictor) determines the effect of your variants (SNPs, insertions, deletions, CNVs or structural variants) on genes, transcripts, and protein sequence, as well as regulatory regions.

  4. SBGrid Consortium

    11 Sep 2019

    We support structural biologists by providing structural biology laboratories with a tested and refined software infrastructure that includes a large library of scientific applications. Members also benefit from access to SBGrid-supported high performance computing...

  5. Aquavit

    11 Sep 2019

    The WV Aquavit collaboration portal, based on HUBzero, is a product of the Appalachian Freshwater Initiative (AFI) project funded by the National Science Foundation (NSF) through the EPSCoR RII Track 1 program [NSF Award 1458952]. It is a resource for research,...

  6. iReceptor

    11 Sep 2019

    iReceptor is a distributed data management system and scientific gateway for mining Next Generation sequence data from immune responses. The main goal of iReceptor is to connect a distributed network of NGS (next-generation sequencing) databases for antibody/B-cell...

  7. Marine Virtual Laboratory (MARVL)

    11 Sep 2019

    MARVL enables researchers interested in marine modelling access to an online portal that simplifies the process of marine modelling. It allows researchers to obtain a pre-prepared package using simple workflow by combining geographic location, datasets, forcing data...

  8. IGSR: The International Genome Sample Resource

    11 Sep 2019

    The goal of the 1000 Genomes Project was to find most genetic variants with frequencies of at least 1% in the populations studied.

  9. Vega

    11 Sep 2019

    Vega is a repository for high-quality gene models produced by the manual annotation of vertebrate genomes.

  10. Characterisation Virtual Laboratory (CVL)

    11 Sep 2019

    The Characterisation Virtual Laboratory (CVL) is an online environment to access imaging tools and data. We provide a remote desktop environment, run on the NeCTAR cloud, which provides access to a range of tools to process atom probe, neuroimaging, structural...

  11. CitSciBio

    11 Sep 2019

    Our intent is to create an online collaboration space for the growing and virtually dispersed biomedical citizen science resources, projects, references, methods, and communities to be discovered and engaged by interested stakeholders. This hub is designed to enable...

  12. ParamChem Gateway (paramchem)

    11 Sep 2019

    ParamChem is a NSF sponsored initiative to develop an integrated cyber environment to address the simulation needs of molecular sciences. The proposed infrastructure will provide reference data organizers and generators as well as workflows for automatic...

  13. Louisiana State University Computational Systems Biology Group

    11 Sep 2019

    Computational Systems Biology aims to develop and apply efficient algorithms to address critical scientific questions through computer simulations and theoretical modeling. The system-wide modeling is particularly relevant in modern biological sciences, where the key...

  14. pharmaHUB

    11 Sep 2019

    The pharmaHUB Engineering Virtual Organization for Pharmaceutical Engineering and Science (EVO-PES) will be the preeminent interdisciplinary resource for sharing and building the science and engineering base for innovative pharmaceutical product development and...

  15. Virtual Clusters for Community Computation

    11 Sep 2019

    VC3 is built from a number of software tools, technologies, and integrative experiences.

  16. Women Writing and Reading in Canada from 1950 (CanWWR)

    11 Sep 2019

    This site documents and reports on the development of a research project, Women Writing and Reading in Canada from 1950. It personalizes literary history as it explores the bond between reader and writer, world and text.

  17. citizenscience.gov

    11 Sep 2019

    Citizenscience.gov is an official government website designed to accelerate the use of crowdsourcing and citizen science across the U.S. government. The site provides a portal to three key assets for federal practitioners: a searchable catalog of federally supported...

  18. CIPRES Portal for inference of large phylogenetic trees

    11 Sep 2019

    Cyberinfrastructure for Phylogenetic Research (CIPRES) project is an open collaboration funded by the National Science Foundation. The goal of the CIPRES project is to enable large-scale phylogenetic reconstructions. For more information please see www.phylo.org. We...

  19. Arctos: Collaborative Collection Management Solution

    11 Sep 2019

    Arctos is an ongoing effort to integrate access to specimen data, collection-management tools, and external resources on the internet.

  20. ContentMine

    11 Sep 2019

    Content mining (also called text and data mining) means processing information in search of new information. To start content mining, some source material is required. Any digital document would do, but automated processing of documents is often restricted by...

  21. SimVascular

    11 Sep 2019

    SimVascular is an open source software suite for cardiovascular simulation, providing a complete pipeline from medical image data to 3D model construction, meshing, and blood flow simulation. SimVacular represents the state of the art in cardiovascular simulation,...

  22. LIS - Legume Information System

    11 Sep 2019

    LIS is a collaborative, community resource to facilitate crop improvement by integrating genetic, genomic, and trait data across legume species.

  23. USD Gateway

    11 Sep 2019

    This Science Gateway provides access to supercomputing resources without the complexity that often accompanies them. By using this site, you can focus on your computational research instead of fretting about complicated interfaces. The USD gateway is equipped to...

  24. CANFAR

    11 Sep 2019

    CANFAR is a consortium of Canadian university astronomers, Compute Canada, and the National Research Council Canada’s Canadian Astronomy Data Centre with support from CANARIE and the Canadian Space Agency.

  25. ens@t registry

    11 Sep 2019

    ENS@T - the European Network for the Study of Adrenal Tumors - is a European consortium, founded to investigate rare adrenal tumors.