SBGrid Portals
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Abstract
The Wide-Search Molecular Replacement (WSMR) computing portal performs a molecular replacement search with the application Phaser against approximately 100,000 SCOP domains. The search results are presented in the form of an LLG/TFZ graph and computations usually converge within 4-14 days. The Deformable Elastic Network (DEN) restraints are a powerful tool for refining structures from low-resolution X-ray crystallographic data sets. Our DEN web service provides access to resources for running computationally intensive DEN refinements in parallel on the Open Science Grid, a US cyberinfrastructure.
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