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Tags: Visualization

Resources (1-9 of 9)

  1. KEGGanim

    09 May 2024

    KEGGanim is a novel web-based tool for visualizing experimental data in the context of biological pathways. KEGGanim produces animations or static images of KEGG pathways by overlaying public or user uploaded high-thourghput data over handdrawn KEGG pathway maps. ...

  2. Reactome

    09 May 2024

    REACTOME is an open-source, open access, manually curated and peer-reviewed pathway database. Our goal is to provide intuitive bioinformatics tools for the visualization, interpretation and analysis of pathway knowledge to support basic and clinical research, genome...


    09 May 2024

    PHYLOViZ is a platform independent JAVA software that allows the analysis of sequence-based typing methods that generate allelic profiles and their associated epidemiological data.

  4. yt project

    09 May 2024

    yt is an open-source, permissively-licensed python package for analyzing and visualizing volumetric data. yt supports structured, variable-resolution meshes, unstructured meshes, and discrete or sampled data such as particles. Focused on driving physically-meaningful...

  5. MyGeoHub

    09 May 2024

    This hub supports the geospatial modeling, data analysis and visualization needs of the broad research and education communities through hosting of groups, datasets, tools, training materials, and educational contents.

  6. DisVis

    09 May 2024

    DisVis allows you to visualize and quantify the information content of distance restraints between macromolecular complexes. It performs a full and systematic 6 dimensional search of the three translational and rotational degrees of freedom to determine the number of...

  7. VMD

    09 May 2024

    VMD (Visual Molecular Dynamics) is designed for modeling, visualization, and analysis of biological systems such as proteins, nucleic acids, lipid bilayer assemblies, etc. It may be used to view more general molecules, as VMD can read standard Protein Data Bank (PDB)...

  8. Flotilla: An Open-Source Toolkit for Single-Cell RNA-Seq Data Analysis

    09 May 2024

    flotilla is a Python package for visualizing transcriptome (RNA expression) data from hundreds of samples.

  9. OpenMSI

    09 May 2024

    The development and application of cutting-edge analytical methods is a core driver for new scientific discoveries, medical diagnostics, and commercial-innovation. Mass spectrometry imaging (MSI) holds the promise for being a transformative technology for advanced...