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Parsl: A Parallel Scripting Library
09 May 2024
Parsl is a parallel scripting library for Python. It provides a model by which complex workflows can be represented in an intuitive Python-based control application. It facilitates transparent parallel execution of workflow components (apps) on any distributed or...
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The Kepler Project
09 May 2024
The Kepler Project is dedicated to furthering and supporting the capabilities, use, and awareness of the free and open source, scientific workflow application, Kepler. Kepler is designed to help scientists, analysts, and computer programmers create, execute, and...
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Science Gateway Platform as a Service (SciGaP)
09 May 2024
The Science Gateways Platform as a service (SciGap) project provides core services for building and hosting science gateways for managing the execution of scientific applications on diverse computing resources, capturing metadata about computational experiments, and...
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Cactus Code
09 May 2024
Cactus provides computational scientists and engineers with a collaborative, modular and portable programming environment for parallel high performance computing. Cactus can make use of many other technologies for HPC, such as Samrai, HDF5, PETSc and PAPI, and...
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Geodashboard
09 May 2024
The Geodashboard is geospatial dashboard for geo-temporal data streams.
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Globus: Research data management simplified
09 May 2024
Globus is a secure, reliable research data management service. With Globus, you can move, share, publish & discover data via a single interface. Whether your files live on a supercomputer, lab cluster, tape archive, public cloud or your laptop, you can manage them...
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C++Explorer
09 May 2024
This repo builds a JupyterHub/Jupyter notebook server which offers an interactive C++ experience. The primary interface for this is through cling notebooks (cling is the C++ interpreter). We extend the cling notebook with certain magics, (namely %%writefile and...
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FutureGateway Framework
09 May 2024
The FutureGateway Framework is a software environment aiming to build quickly and securely well structured Science Gateways. It consists of a set of services, scripts and utilities aiming to ease the creation and the maintenance of their related ScienceGateays...
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TAPIS
09 May 2024 | Science Gateways
The Tapis Framework provides a hosted, unified web-based API for securely managing computational workloads across institutions so that experts can focus on their research instead of the technology needed to accomplish it. The advanced computing infrastructure landscape has evolved tremendously...
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Jupyter Notebook
09 May 2024 | Science Gateways
The Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include: data cleaning and transformation, numerical simulation, statistical modeling, data...
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CILogon
09 May 2024 | Science Gateways
CILogon provides an integrated open source identity and access management platform for research collaborations, combining federated identity management (Shibboleth, InCommon) with collaborative organization management (COmanage). Federated identity management enables...
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Petrel: A Programmatically Accessible Research Data Service
09 May 2024 | Science Gateways
Petrel is a pilot of data service for researchers that provides a simple and intuitive interface for self-managed project-based data sharing capability.The service provides storage on disks owned and managed by ALCF, and has a total capacity of 3 PB of usable ...
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CANARIE's Research Platforms
09 May 2024 | Science Gateways
The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.
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Wheat Tilling
09 May 2024 | Science Gateways
Wheat Target Induced Local Lesions In Genome (TILLING) project based on the tetraploid wheat line Triticum turgidum cv. Kronos. This project entails targeted re-sequencing of the protein coding regions of over 1500 EMS mutagenized individuals from the Kronos...
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TreeGenes
09 May 2024 | Science Gateways
TreeGenes is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest...
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GenSAS
09 May 2024 | Science Gateways
The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and...
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ORCA(Quantum Chemistry Program)
09 May 2024 | Science Gateways
The program ORCA is a modern electronic structure program package. ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of...
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BamBam
09 May 2024 | Science Gateways
BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...
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Genomicus
09 May 2024 | Science Gateways
Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in...
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Genomics Virtual Laboratory (GVL)
09 May 2024 | Science Gateways
The Genomics Virtual Laboratory (GVL) provides a cloud-based suite of genomics analysis tools for research and training.
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Genome Database for Rosaceae (GDR)
09 May 2024 | Science Gateways
The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...