Decryptor

09 May 2024

Analyses data from tandem mass spectrometry of human proteome for the presence of point alterations. Subsequently, decryptor deduces DNA/mRNA alterations whenever possible.

DELTA Topology Gateway

09 May 2024 | Science Gateways

The project “Descriptors of Energy Landscapes Using Topological Data Analysis (DELTA)” is an National Science Foundation (NSF) funded HDR Institute Frameworks that is advancing topological data analysis (TDA) and machine learning algorithms for the study of intensive...

DENIS@Home

09 May 2024 | Science Gateways

DENIS uses volunteer hosts to compute large packets of cardiac electrophysiology simulations. You can participate by downloading and running a free program on your computer. By using the idle time of your computer, you’d be helping researchers on their research...

DESCRAMBLE

09 May 2024 | Science Gateways

DESCRAMBLE gateway is an access point to a Virtual Research Environment (VRE) deployed and operated in the context of DESCRAMBLE EU-project to support participants in data and information management and collaboration. The Virtual Research Environments are "systems"...

DesignSafe-CI

09 May 2024 | Science Gateways

DesignSafe-ci.org (DesignSafe) is the CI component of the NHERI collaboration. DesignSafe embraces a “cloud” strategy for the “big data” generated in natural hazards engineering research. It supports research workflows, data analysis and visualization, and the full...

DESIRA Gateway

09 May 2024 | Science Gateways

DESIRA Gateway helps the project to develop the concept of Socio-Cyber-Physical Systems to advance understanding of the impact of digitisation in rural areas, linking analysis directly to the United Nation’s Sustainable Development Goals. DESIRA enrols agriculture,...

DFC (DataNet Federation Consortium)

09 May 2024 | Science Gateways

Major science and engineering initiatives are dependent upon massive data collections that comprise observational data, experimental data, simulation data, and engineering data. To support science and engineering collaborations, a policy-driven national data...

Diagrid

09 May 2024 | Science Gateways

Allows science software to be run through a web browser

Digital Rocks

09 May 2024 | Science Gateways

Digital Rocks is a data portal for fast storage and retrieval, sharing, organization and analysis of images of varied porous micro-structures. It has the purpose of enhancing research resources for modeling/prediction of porous material properties in the fields of...

DipCheck

09 May 2024 | Science Gateways

DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

Distant Reader Gateway

09 May 2024 | Science Gateways

The Distant Reader is a tool for reading.The Distant Reader empowers you to use & understand large amounts of textual information both quickly & easily. For example, the Distant Reader can consume the entire issue of a scholarly journal, the complete...

DisVis

09 May 2024 | Science Gateways

DisVis allows you to visualize and quantify the information content of distance restraints between macromolecular complexes. It performs a full and systematic 6 dimensional search of the three translational and rotational degrees of freedom to determine the number of...

DNATCO v3.0

09 May 2024 | Science Gateways

It assigns 84 DNA/RNA conformers based on values of their 12 backbone torsion parameters.

DoD HPC portal

09 May 2024 | Science Gateways

US Department of Defense (DoD) High Performance Computing Modernization Program (HPCMP) provides a Web-based software-as-a-service (SaaS) access approach known as the HPC (High Performance Computing) Portal. The Portal supports the life cycle of design and...

Dolbico

09 May 2024 | Science Gateways

A database for local biomolecular conformers

dREG gateway

09 May 2024 | Science Gateways

The dREG gateway allows users to identify the location of promoters and enhancers using PRO-seq, GRO-seq, or ChRO-seq data. Our genomes encode not just protein-coding genes, but also the transcriptional regulatory elements (TREs) that encode the temporal and spatial...

DRIHM Portal

09 May 2024 | Science Gateways

The Distributed Research Infrastructure for Hydro-Meteorology (DRIHM) project intends to develop a prototype e-Science environment to facilitate this collaboration and provide end-to-end HMR services (models, datasets and post-processing tools) at the European level,...

Drug Effect Database Gateway

09 May 2024 | Science Gateways

With assistance from the SGCI, we have developed a gateway which acts as an interface to a database of side effects resulting from single and multiple drug exposures. The side effects are computed via deep learning models which are designed to be computed on the Open...

Drupal

09 May 2024 | Science Gateways

Drupal is content management software. It's used to make many of the websites and applications you use every day. Drupal has great standard features, like easy content authoring, reliable performance, and excellent security. But what sets it apart is its flexibility;...

DSpace - open digital repository

09 May 2024 | Science Gateways

DSpace is the software of choice for academic, non-profit, and commercial organizations building open digital repositories. It preserves and enables easy and open access to all types of digital content including text, images, moving images, mpegs and data sets. ...

e-Biogenouest

09 May 2024 | Science Gateways

e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

E. coli Gene Expression Database (GenExpDB)

09 May 2024 | Science Gateways

The University of Oklahoma Bioinformatics Core hosts the E. coli Gene Expression Database. EcoliGenExpDB was designed from the biologist’s perspective, with a tool box-style, integrated and interactive display interface and a simplified warehouse architecture, for...

Earth Life Consortium (ELC)

09 May 2024 | Science Gateways

The Earth-Life Consortium (ELC) seeks to make all paleobiological data easily discoverable, accessible, and analyzable, with the larger goal of understanding the interactions between the Earth's biological and geophysical systems across all timescales of the Earth's...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

EarthCube

09 May 2024 | Science Gateways

EarthCube was initiated by the National Science Foundation (NSF) in 2011 to transform geoscience research by developing cyberinfrastructure to improve access, sharing, visualization, and analysis of all forms of geosciences data and related resources. As a...