Anecdata.org

09 May 2024

Anecdata.org is a free online citizen science platform developed by the Community Lab at the MDI Biological Laboratory in Bar Harbor, Maine.Anecdata.org is used by hundreds of individuals and organizations to gather and access citizen science...

ArrayExpress

09 May 2024

ArrayExpress Archive of Functional Genomics Data stores data from high-throughput functional genomics experiments, and provides these data for reuse to the research community.

BamBam

09 May 2024 | Tools

BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...

Benchmark Energy & Geometry Database (BEGDB)

09 May 2024 | Science Gateways

The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

BIGNASim

09 May 2024 | Science Gateways

BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

BioFragment Database (BFDb)

09 May 2024 | Science Gateways

The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

BRENDA

09 May 2024 | Science Gateways

BRENDA is the main collection of enzyme functional data available to the scientific community.

Carbon Mapper

09 May 2024 | Science Gateways

Carbon Mapper’s goal is to help stakeholders visualize and understand the earth’s carbon cycle and related human activity and to seek feedback on how to improve data from monitoring systems.

CAZY

09 May 2024 | Science Gateways

The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

COCALC

09 May 2024 | Science Gateways

CoCalc(Collaborative Calculation in the Cloud) is a sophisticated web service for online computation and provides the collaborative environment to share your files privately with project collaborators.

CoGe(Comparative Genomics)

09 May 2024 | Science Gateways

CoGe is a platform for performing Comparative Genomics research. It provides an open-ended network of interconnected tools to manage, analyze, and visualize next-gen data.

CottonGen

09 May 2024 | Science Gateways

CottonGen is a new cotton community genomics, genetics and breeding database being developed to enable basic, translational and applied research in cotton. It is being built using the open-source Tripal database infrastructure.

Crops in silico

09 May 2024 | Science Gateways

Crops in silico is a global scientific collaboration that aims to harness the great strides in understanding of plant function from genes to whole plants, to accelerate forward approaches to crop breeding and bioengineering. The Crops in silico community is comprised...

CTD² Data Portal

09 May 2024 | Science Gateways

CTD2 bridges the gap between the enormous volumes of data generated by genomic characterization studies and the ability to use these data for the development of human cancer therapeutics. It specializes in computational and functional genomics approaches critical for...

CyVerse

09 May 2024 | Science Gateways

CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...

DataOne

09 May 2024 | Science Gateways

DataONE is a community driven project providing access to data across multiple member repositories, supporting enhanced search and discovery of Earth and environmental data. DataONE promotes best practices in data management through responsive educational resources...

DipCheck

09 May 2024 | Science Gateways

DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

EarthCube

09 May 2024 | Science Gateways

EarthCube was initiated by the National Science Foundation (NSF) in 2011 to transform geoscience research by developing cyberinfrastructure to improve access, sharing, visualization, and analysis of all forms of geosciences data and related resources. As a...

earthscope

09 May 2024 | Science Gateways

EarthScope is a program of the National Science Foundation (NSF) that has deployed thousands of seismic, GPS, and other geophysical instruments to study the structure and evolution of the North American continent and the processes that cause earthquakes and volcanic...

EcologyPlus

09 May 2024 | Science Gateways

Our Mission: EcologyPlus connects diverse college students and early career scientists with timely and relevant career opportunities and a community of peers and professionals in ecology and related careers across all sectors.What is EcologyPlus? ...

EDISON for Everything for Computational Science & Engineering

09 May 2024 | Science Gateways

This science gateway in KISTI, South Korea, is for the bridge to computational science for education and advanced research.

European Variation Archive (EVA)

09 May 2024 | Science Gateways

The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

EVER-EST

09 May 2024 | Science Gateways

The EVER-EST project (European Virtual Environment for Research – Earth Science Themes: a solution ) will create a virtual research environment (VRE) focussed on the requirements of the Earth Science community. Within the earth sciences there are major challenges...

Genome Database for Rosaceae (GDR)

09 May 2024 | Science Gateways

The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...