3DEM (3-D ELECTRON MICROSCOPY)

09 May 2024

A web-based research platform focused on developing and disseminating new technologies for enhanced resolution 3-dimensional electron microscopy.

Amos Gateway

09 May 2024

The overarching goal of the project is create a comprehensive cyberinfrastructure for the atomic, molecular, and optical science (AMOS) community where practitioners can access a synergistic, full-scope platform for computational AMOS. The developers...

Apache Airavata

09 May 2024

Apache Airavata is a software framework that enables you to compose, manage, execute, and monitor large scale applications and workflows on distributed computing resources such as local clusters, supercomputers,computational grids, and computing clouds.

Benchmark Energy & Geometry Database (BEGDB)

09 May 2024

The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

BIGNASim

09 May 2024

BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

BioFragment Database (BFDb)

09 May 2024

The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

BRENDA

09 May 2024

BRENDA is the main collection of enzyme functional data available to the scientific community.

CAZY

09 May 2024

The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

Center for Applied Internet Data Analysis (CAIDA)

09 May 2024

The Center for Applied Internet Data Analysis (CAIDA) conducts network research and builds research infrastructure to support large-scale data collection, curation, and data distribution to the scientific research community. The group, located at the federally funded...

Chem Compute

09 May 2024 | Science Gateways

The Chem Compute website allows students to easily access state of the art computational software for free. Our hope is that this will enable faculty to incorporate computational chemistry into their undergraduate teaching and research curriculum without the hassle...

CILogon

09 May 2024 | Science Gateways

CILogon provides an integrated open source identity and access management platform for research collaborations, combining federated identity management (Shibboleth, InCommon) with collaborative organization management (COmanage). Federated identity management enables...

CIPRES Portal for inference of large phylogenetic trees

09 May 2024 | Science Gateways

Cyberinfrastructure for Phylogenetic Research (CIPRES) project is an open collaboration funded by the National Science Foundation. The goal of the CIPRES project is to enable large-scale phylogenetic reconstructions. For more information please see www.phylo.org. We...

CitSci.org

09 May 2024 | Science Gateways

We support your citizen science. At CitSci.org, you create your own projects where trained volunteers and scientists together answer local, regional, and global questions, inform natural resource decisions, advance scientific understanding, and improve environmental...

CloudLaunch

09 May 2024 | Science Gateways

CloudLaunch is an extensible application that can be used to launch virtual appliances of your choice on a public or private cloud. A virtual appliance is a virtual machine that packages a ready-to-run application(s), eliminating the need to install and configure...

Coastal Emergency Risks Assessment (CERA)

09 May 2024 | Science Gateways

The Coastal Emergency Risks Assessment (CERA) group delivers storm surge and wave predictions for impending or active tropical cyclones in the United States. Based on the Advanced Circulation and Storm Surge model (ADCIRC), the CERA web mapping application provides...

Community Surface Dynamics Modeling System (CSDMS)

09 May 2024 | Science Gateways

CSDMS is an organization that promotes computational modeling of earth-surface processes by providing support for community, computing, and education. The Community Surface Dynamics Modeling System (CSDMS) deals with the Earth's surface - the ever-changing, dynamic...

CoMSES Net: Network for Computational Modeling in the Social and Ecological Sciences

09 May 2024 | Science Gateways

CoMSES Net is an international network of researchers, educators and professionals with the common goal of improving the way we develop, share, and use computational modeling in the social and ecological sciences. 

COSMIC2 Science Gateway

09 May 2024 | Science Gateways

Structural biology is in the midst of a revolution. Instrumentation and software improvements have allowed for the full realization of cryo-electron microscopy (cryo-EM) as a tool capable of determining atomic structures of protein and macromolecular samples. These...

Data Discovery Studio

09 May 2024 | Science Gateways

Data Discovery Studio indexes over 1.6 million geoscience resources from 40+ academic, government and international scientific data repositories and catalogs. It works across geoscience domains, letting users find the data they need via text-based, spatio-temporal...

DipCheck

09 May 2024 | Science Gateways

DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

Drug Effect Database Gateway

09 May 2024 | Science Gateways

With assistance from the SGCI, we have developed a gateway which acts as an interface to a database of side effects resulting from single and multiple drug exposures. The side effects are computed via deep learning models which are designed to be computed on the Open...

EcologyPlus

09 May 2024 | Science Gateways

Our Mission: EcologyPlus connects diverse college students and early career scientists with timely and relevant career opportunities and a community of peers and professionals in ecology and related careers across all sectors.What is EcologyPlus? ...

ENIGMA Bipolar Disorder: Brain Age Analysis Gateway

09 May 2024 | Science Gateways

The main purpose of this gateway is to gather data for analysis on how bi-polar impact human brain aging. The gateway feature includes user management, data sharing agreement, upload data files & validation, super-uploader, metadata graphs, combining all uploaded...

European Variation Archive (EVA)

09 May 2024 | Science Gateways

The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

Galaxy Software Framework

09 May 2024 | Science Gateways

Galaxy software framework is an open-source application. Its goal is to develop and maintain a system that enables researchers without informatics expertise to perform computational analyses through the web. A user interacts with Galaxy through the web by uploading...