3DEM (3-D ELECTRON MICROSCOPY)

09 May 2024

A web-based research platform focused on developing and disseminating new technologies for enhanced resolution 3-dimensional electron microscopy.

Amos Gateway

09 May 2024

The overarching goal of the project is create a comprehensive cyberinfrastructure for the atomic, molecular, and optical science (AMOS) community where practitioners can access a synergistic, full-scope platform for computational AMOS. The developers...

Anecdata.org

09 May 2024

Anecdata.org is a free online citizen science platform developed by the Community Lab at the MDI Biological Laboratory in Bar Harbor, Maine.Anecdata.org is used by hundreds of individuals and organizations to gather and access citizen science...

ATLAS@Home

09 May 2024

ATLAS@Home is a research project that uses volunteer computing to run simulations of the ATLAS experiment at CERN. You can participate by downloading and running a free program on your computer.

Benchmark Energy & Geometry Database (BEGDB)

09 May 2024

The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

BIGNASim

09 May 2024

BIGNASim, a comprehensive platform including a database system and an analysis portal, aimed to be a general database for handling nucleic acids simulations.

BioFragment Database (BFDb)

09 May 2024

The BioFragment Database (BFDb) is an open-data platform for computational chemistry analysis of noncovalent interactions and collects >3000 bifragment contacts directly from biological systems.

BRENDA

09 May 2024

BRENDA is the main collection of enzyme functional data available to the scientific community.

C++Explorer

09 May 2024

This repo builds a JupyterHub/Jupyter notebook server which offers an interactive C++ experience. The primary interface for this is through cling notebooks (cling is the C++ interpreter). We extend the cling notebook with certain magics, (namely %%writefile and...

CAZY

09 May 2024

The CAZy database describes the families of structurally-related catalytic and carbohydrate-binding modules (or functional domains) of enzymes that degrade, modify, or create glycosidic bonds.

Center for Academic Research and Training in Anthropogeny (CARTA)

09 May 2024

CARTA is a virtual organization formed in order to promote transdisciplinary research into human origins, drawing on methods from a number of traditional disciplines spanning the social, biomedical, biological, computational and engineering, physical and chemical...

Chem Compute

09 May 2024 | Science Gateways

The Chem Compute website allows students to easily access state of the art computational software for free. Our hope is that this will enable faculty to incorporate computational chemistry into their undergraduate teaching and research curriculum without the hassle...

COCALC

09 May 2024 | Science Gateways

CoCalc(Collaborative Calculation in the Cloud) is a sophisticated web service for online computation and provides the collaborative environment to share your files privately with project collaborators.

Community Surface Dynamics Modeling System (CSDMS)

09 May 2024 | Science Gateways

CSDMS is an organization that promotes computational modeling of earth-surface processes by providing support for community, computing, and education. The Community Surface Dynamics Modeling System (CSDMS) deals with the Earth's surface - the ever-changing, dynamic...

CyberGIS Gateway

09 May 2024 | Science Gateways

Geographic information is collected to support scientific investigations and decision-making in a wide variety of application domains (e.g., environment science, transportation, public health, and business). Enormous computational resources are needed to store and...

CyVerse

09 May 2024 | Science Gateways

CyVerse fills a niche created by the computing epoch and a rapidly evolving world. Developing solutions to today’s grand scientific challenges means that we must understand how the organisms that contribute to our food, fuels, and ecosystem are shaped by interactions...

DataHub

09 May 2024 | Science Gateways

DataHub is a cross-domain platform for preserving, sharing, and discovering data produced by scientific research. Datasets are organized by experiments or cases, with a simple common structure for metadata, file collections, and data tables containing measurements...

DesignSafe-CI

09 May 2024 | Science Gateways

DesignSafe-ci.org (DesignSafe) is the CI component of the NHERI collaboration. DesignSafe embraces a “cloud” strategy for the “big data” generated in natural hazards engineering research. It supports research workflows, data analysis and visualization, and the full...

DipCheck

09 May 2024 | Science Gateways

DipCheck is a validation tool for the evaluation of protein backbone geometry, developed by Joana Pereira and Victor Lamzin at the EMBL Hamburg. The tool uses a Euclidian 3D space (DipSpace) of the orthogonal descriptors of the geometry of a 5-atom dipeptide unit:...

e-Biogenouest

09 May 2024 | Science Gateways

e-Biogenouest is an open, web-based platform for scientific collaboration in Life Sciences. It represents the gate towards a Western France Virtual Research Environment (VRE) disseminating e-Science concepts into Life Sciences. This VRE is a first step to go towards...

Earth Science Information Partners (ESIP)

09 May 2024 | Science Gateways

The Federation of Earth Science Information Partners (ESIP) is an open, networked community that brings together science, data and information technology practitioners. Participation in ESIP is beneficial because it provides an intellectual commons to expose, gather...

eBird

09 May 2024 | Science Gateways

eBird began with a simple idea—that every birdwatcher has unique knowledge and experience. Our goal is to gather this information in the form of checklists of birds, archive it, and freely share it to power new data-driven approaches to science, conservation and...

European Variation Archive (EVA)

09 May 2024 | Science Gateways

The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

HTRC Analytics

09 May 2024 | Science Gateways

HathiTrust Research Center (HTRC) enables computational analysis of works in the HathiTrust Digital Library (HTDL) to facilitate non-profit research and educational uses of the collection. HTRC, which is co-located at Indiana University and the University of Illinois...

HydroShare

09 May 2024 | Science Gateways

HydroShare is an online collaboration environment for sharing data, models, and code.