Skip to main content

Science Gateways will have scheduled maintenance work on Tuesday, June 25, 2024. The platform will operate normally for most of the day, except for a 2-4 hour outage period. Please plan accordingly and we do apologize for any inconvenience.

Resources: All

Find a resource
  1. life x
  2. softwareentry x
  3. genome x
  1. PeanutBase

    09 May 2024

    This web portal is designed to provide convenient access to peanut genetic and genomic data deriving from U.S. and international research, and particularly from the Peanut Genomics Initiative: The U.S. industry has embarked on an ambitious plan to map the peanut...

  2. CyberGIS Toolkit

    09 May 2024

    CyberGIS Toolkit is a suite of loosely coupled open-source geospatial software components that provide computationally scalable spatial analysis and modeling capabilities enabled by advanced cyberinfrastructure. CyberGIS Toolkit represents a deep approach to CyberGIS...

  3. Xenon

    09 May 2024

    Xenon is a middleware abstraction library. It provides a simple programming interface to various pieces of software that can be used to access distributed compute and storage resources.

  4. Parsl: A Parallel Scripting Library

    09 May 2024

    Parsl is a parallel scripting library for Python. It provides a model by which complex workflows can be represented in an intuitive Python-based control application. It facilitates transparent parallel execution of workflow components (apps) on any distributed or...

  5. The Kepler Project

    09 May 2024

    The Kepler Project is dedicated to furthering and supporting the capabilities, use, and awareness of the free and open source, scientific workflow application, Kepler. Kepler is designed to help scien­tists, analysts, and computer programmers create, execute, and...

  6. Science Gateway Platform as a Service (SciGaP)

    09 May 2024

    The Science Gateways Platform as a service (SciGap) project provides core services for building and hosting science gateways for managing the execution of scientific applications on diverse computing resources, capturing metadata about computational experiments, and...

  7. Cactus Code

    09 May 2024

    Cactus provides computational scientists and engineers with a collaborative, modular and portable programming environment for parallel high performance computing. Cactus can make use of many other technologies for HPC, such as Samrai, HDF5, PETSc and PAPI, and...

  8. Geodashboard

    09 May 2024

    The Geodashboard is geospatial dashboard for geo-temporal data streams.

  9. Globus: Research data management simplified

    09 May 2024

    Globus is a secure, reliable research data management service. With Globus, you can move, share, publish & discover data via a single interface. Whether your files live on a supercomputer, lab cluster, tape archive, public cloud or your laptop, you can manage them...

  10. C++Explorer

    09 May 2024

    This repo builds a JupyterHub/Jupyter notebook server which offers an interactive C++ experience. The primary interface for this is through cling notebooks (cling is the C++ interpreter). We extend the cling notebook with certain magics, (namely %%writefile and...

  11. FutureGateway Framework

    09 May 2024

    The FutureGateway Framework is a software environment aiming to build quickly and securely well structured Science Gateways. It consists of a set of services, scripts and utilities aiming to ease the creation and the maintenance of their related ScienceGateays...

  12. TAPIS

    09 May 2024 | Science Gateways

    The Tapis Framework provides a hosted, unified web-based API for securely managing computational workloads across institutions so that experts can focus on their research instead of the technology needed to accomplish it. The advanced computing infrastructure landscape has evolved tremendously...

  13. Jupyter Notebook

    09 May 2024 | Science Gateways

    The Jupyter Notebook is an open-source web application that allows you to create and share documents that contain live code, equations, visualizations and narrative text. Uses include: data cleaning and transformation, numerical simulation, statistical modeling, data...

  14. CILogon

    09 May 2024 | Science Gateways

    CILogon provides an integrated open source identity and access management platform for research collaborations, combining federated identity management (Shibboleth, InCommon) with collaborative organization management (COmanage). Federated identity management enables...

  15. Petrel: A Programmatically Accessible Research Data Service

    09 May 2024 | Science Gateways

    Petrel is a pilot of data service for researchers that provides a simple and intuitive interface for self-managed project-based data sharing capability.The service provides storage on disks owned and managed by ALCF, and has a total capacity of 3 PB of usable ...

  16. CANARIE's Research Platforms

    09 May 2024 | Science Gateways

    The goal of CANARIE’s Research Software Program is to accelerate discovery and give Canada a first-mover advantage in accessing and leveraging digital infrastructure resources and tools.

  17. Wheat Tilling

    09 May 2024 | Science Gateways

    Wheat Target Induced Local Lesions In Genome (TILLING) project based on the tetraploid wheat line Triticum turgidum cv. Kronos. This project entails targeted re-sequencing of the protein coding regions of over 1500 EMS mutagenized individuals from the Kronos...

  18. TreeGenes

    09 May 2024 | Science Gateways

    TreeGenes is a collection of forest tree genome databases and other forest genetic information resources for the international forest genetics community. Dendrome is part of a larger collaborative effort to construct genome databases for major crop and forest...

  19. GenSAS

    09 May 2024 | Science Gateways

    The Genome Sequence Annotation Server (GenSAS) is an online platform that provides a pipeline for whole genome structural and functional annotation. Users can upload genome sequences and select from a variety of tools for repeat masking, prediction of gene models and...

  20. ORCA(Quantum Chemistry Program)

    09 May 2024 | Science Gateways

    The program ORCA is a modern electronic structure program package. ORCA is a flexible, efficient and easy-to-use general purpose tool for quantum chemistry with specific emphasis on spectroscopic properties of open-shell molecules. It features a wide variety of...

  21. BamBam

    09 May 2024 | Science Gateways

    BamBam is a package of tools for genome sequence analysis. BamBam contains tools that facilitate summarizing data from BAM alignment files and identifying features such as SNPs, indels, and haplotypes represented in those alignments. It aims to use parameters that...

  22. Genomicus

    09 May 2024 | Science Gateways

    Genomicus is a genome browser that enables users to navigate in genomes in several dimensions: linearly along chromosome axes, transversaly across different species, and chronologicaly along evolutionary time. Once a query gene has been entered, it is displayed in...

  23. Genomics Virtual Laboratory (GVL)

    09 May 2024 | Science Gateways

    The Genomics Virtual Laboratory (GVL) provides a cloud-based suite of genomics analysis tools for research and training.

  24. Genome Database for Rosaceae (GDR)

    09 May 2024 | Science Gateways

    The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and...