Skip to main content

Resources: All

Find a resource
  1. softwareentry x
  2. database x
  1. InterRidge Vents Database

    09 May 2024

    InterRidge Vents Database is to provide a comprehensive list of active submarine hydrothermal vent fields for use in academic research and education.

  2. Molecular Space

    09 May 2024

    The Clean Energy Project (CEP) is a virtual high-throughput discovery and design effort for the next generation of plastic solar cell materials. We study millions of candidate structures to identify suitable compounds for the harvesting of renewable energy from the...

  3. European Variation Archive (EVA)

    09 May 2024

    The European Variation Archive (EVA) is an open-access database of all types of genetic variation data from all species.

  4. The Triticeae Toolbox (T3)

    09 May 2024

    T3 is the webportal for the data generated by the Triticeae Coordinated Agricultural Project (CAP), funded by the National Institute for Food and Agriculture (NIFA) of the United States Department of Agriculture (USDA). T3 contains SNP, phenotypic, and pedigree data...

  5. NEWT(NERSC Web Toolkit)

    09 May 2024

    NEWT is bringing High Performance Computing (HPC) to the web through easy to write web applications. We think that writing applications for the web should be a simple task. We want to make HPC resources accessible and useful to scientists who are more comfortable...

  6. PHARMACOLOGY

    09 May 2024

    One of the main aims is to provide a searchable database with quantitative information on drug targets and the prescription medicines and experimental drugs that act on them. The information in the database is presented at two levels: the initial view or landing...

  7. ORCA (Open Resource Control Architecture)

    09 May 2024

    ORCA is a software framework and open-source platform for managing a programmatically controllable shared substrate, which may contain any combination of servers, storage, networks, or other components. This class of systems is often called cloud computing or utility...

  8. Benchmark Energy & Geometry Database (BEGDB)

    09 May 2024

    The Benchmark Energy & Geometry Database (BEGDB) collects results of highly accurate QM calculations of molecular structures, energies and properties. These data can serve as benchmarks for testing and parameterization of other computational methods.

  9. OSiRIS - Open Storage Research Infrastructure

    09 May 2024

    OSiRIS has storage resources at Wayne State University, Michigan State University, and University of Michigan. We can store data spread across all three sites or target storage resources at a subset of the sites. The end goal is that researchers have a readily...

  10. USQCD

    09 May 2024

    USQCD is a collaboration of US scientists developing and using large-scale computers for calculations in lattice quantum chromodynamics. Lattice QCD calculations allow us to understand the results of particle and nuclear physics experiments in terms of QCD, the...

  11. RADICAL Cybertools

    09 May 2024

    RADICAL Cybertools is an abstractions-based suite of well-defined capabilities that are architected for scalable, interoperable and sustainable approaches to support science on a range of high-performance and distributed computing systems. It currently...

  12. Cloudmesh Client Toolkit

    09 May 2024

    The cloudmesh client toolkit is a lightweight client interface of accessing heterogeneous clouds, clusters, and workstations right from the users computer. The user can manage his own set of resources he would like to utilize. Thus the user has the freedom to...

  13. Tripal

    09 May 2024

    Tripal is a toolkit for construction of online biological (genetics, genomics, breeding, etc), community database, and is a member of the GMOD family of tools. Tripal provides by default integration with the GMOD Chado database schema and Drupal, a popular Content...

  14. Dataverse - Open source research data repository software

    09 May 2024

    Dataverse is an open source web application to share, preserve, cite, explore, and analyze research data. It facilitates making data available to others, and allows you to replicate others' work more easily. Researchers, journals, data authors, publishers, data...

  15. Code Ocean

    09 May 2024

    Code Ocean is a cloud-based computational reproducibility platform that provides researchers and developers an easy way to share, discover and run code published in academic journals and conferences.

  16. yt project

    09 May 2024

    yt is an open-source, permissively-licensed python package for analyzing and visualizing volumetric data. yt supports structured, variable-resolution meshes, unstructured meshes, and discrete or sampled data such as particles. Focused on driving physically-meaningful...

  17. Einstein Toolkit

    09 May 2024

    The Einstein Toolkit is a community-driven software platform of core computational tools to advance and support research in relativistic astrophysics and gravitational physics. It aims to include any computational tool the fits into it's scope. Currently, a large...

  18. SUPER Project

    09 May 2024

    The Institute for Sustained Performance, Energy, and Resilience (SUPER) project is a broadly-based SciDAC institute with expertise in compilers and other system tools, performance engineering, energy management, and resilience. The goal of the project is to ensure...

  19. Apache Airavata

    09 May 2024

    Apache Airavata is a software framework that enables you to compose, manage, execute, and monitor large scale applications and workflows on distributed computing resources such as local clusters, supercomputers,computational grids, and computing clouds.

  20. The Bro Network Security Monitor

    09 May 2024

    Bro is a passive, open-source network traffic analyzer. It is primarily a security monitor that inspects all traffic on a link in depth for signs of suspicious activity. More generally, however, Bro supports a wide range of traffic analysis tasks even outside of the...

  21. AtlanticWave-Software Defined Exchange (SDX)

    09 May 2024

    AtlanticWave-Software Defined Exchange (SDX) is a distributed intercontinental experimental SDX, supporting research, experimental deployments, prototyping and interoperability testing, on national and international scales.

  22. DataConservancy (DC)

    09 May 2024

    The Data Conservancy (DC) was launched through a grant from the National Science Foundation’s DataNet program, which built upon prior experience with managing data from the Sloan Digital Sky Survey. The grant provided the DC team an opportunity to broaden its data...

  23. MetalPDB

    09 May 2024

    MetalPDB collects and allows easy access to the knowledge on metal sites in biological macromolecules, starting from the structural information contained in the Protein Data Bank (PDB).

  24. iRODS

    09 May 2024

    The Integrated Rule Oriented Data System, iRODS, is open source data management software designed to manage data sets that are big, important, and complex. Hundreds of organizations worldwide use iRODS to control their records and research data. ...

  25. SwissRegulon Portal

    09 May 2024

    A repository of computational biology tools and databases developed by the van Nimwegen lab